Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 AC074255.1-201ENST00000511259 501 ntBASIC5.41□□□□□ -1.54
SATB2Q9UPW6 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 AC010547.7-201ENST00000570323 333 ntBASIC5.41□□□□□ -1.54
SATB2Q9UPW6 RN7SL708P-201ENST00000580952 299 ntBASIC5.41□□□□□ -1.54
SATB2Q9UPW6 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 AL391597.1-201ENST00000618707 694 ntBASIC5.41□□□□□ -1.54
SATB2Q9UPW6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 AL929601.4-201ENST00000613011 1341 ntBASIC5.41□□□□□ -1.54
SATB2Q9UPW6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SATB2Q9UPW6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 MTCO1P15-201ENST00000529569 1526 ntBASIC5.4□□□□□ -1.54
SATB2Q9UPW6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 RPL23P2-201ENST00000320371 421 ntBASIC5.4□□□□□ -1.54
SATB2Q9UPW6 RN7SKP115-201ENST00000363177 317 ntBASIC5.4□□□□□ -1.54
SATB2Q9UPW6 RNA5SP30-201ENST00000365552 115 ntBASIC5.4□□□□□ -1.54
SATB2Q9UPW6 RPS6P23-201ENST00000413224 722 ntBASIC5.4□□□□□ -1.54
SATB2Q9UPW6 MTND4LP21-201ENST00000415303 295 ntBASIC5.4□□□□□ -1.54
SATB2Q9UPW6 NENFP1-201ENST00000419476 466 ntBASIC5.4□□□□□ -1.54
SATB2Q9UPW6 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 AC097523.2-201ENST00000435551 652 ntBASIC5.4□□□□□ -1.54
SATB2Q9UPW6 AL772161.1-201ENST00000439130 476 ntBASIC5.4□□□□□ -1.54
SATB2Q9UPW6 AL450263.2-201ENST00000439400 589 ntBASIC5.4□□□□□ -1.54
SATB2Q9UPW6 AC245047.2-201ENST00000441060 530 ntBASIC5.4□□□□□ -1.54
SATB2Q9UPW6 TCEA1P3-201ENST00000443005 880 ntBASIC5.4□□□□□ -1.54
SATB2Q9UPW6 THAP12P8-201ENST00000447914 2115 ntBASIC5.4□□□□□ -1.54
SATB2Q9UPW6 RPS26P41-201ENST00000450370 284 ntBASIC5.4□□□□□ -1.54
SATB2Q9UPW6 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.4□□□□□ -1.54
SATB2Q9UPW6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SATB2Q9UPW6 MFSD8-239ENST00000641590 2479 ntBASIC5.4□□□□□ -1.55
SATB2Q9UPW6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SATB2Q9UPW6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SATB2Q9UPW6 DDX18P6-201ENST00000450119 1997 ntBASIC5.4□□□□□ -1.55
SATB2Q9UPW6 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.4□□□□□ -1.55
SATB2Q9UPW6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SATB2Q9UPW6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SATB2Q9UPW6 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
SATB2Q9UPW6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.4□□□□□ -1.55
SATB2Q9UPW6 RBPJP2-201ENST00000618187 1444 ntBASIC5.4□□□□□ -1.55
SATB2Q9UPW6 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 CDC27P2-201ENST00000425026 1922 ntBASIC5.39□□□□□ -1.55
SATB2Q9UPW6 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 AC005294.1-201ENST00000355509 281 ntBASIC5.39□□□□□ -1.55
SATB2Q9UPW6 U8.4-201ENST00000363626 134 ntBASIC5.39□□□□□ -1.55
SATB2Q9UPW6 BMS1P3-201ENST00000372011 932 ntBASIC5.39□□□□□ -1.55
SATB2Q9UPW6 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 MIR550A3-201ENST00000390735 95 ntBASIC5.39□□□□□ -1.55
SATB2Q9UPW6 RNA5SP91-201ENST00000390902 119 ntBASIC5.39□□□□□ -1.55
SATB2Q9UPW6 RPL37P18-201ENST00000411602 243 ntBASIC5.39□□□□□ -1.55
SATB2Q9UPW6 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 AL133325.1-201ENST00000421090 382 ntBASIC5.39□□□□□ -1.55
SATB2Q9UPW6 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 AL590762.4-201ENST00000425885 253 ntBASIC5.39□□□□□ -1.55
SATB2Q9UPW6 OR52B5P-201ENST00000435337 951 ntBASIC5.39□□□□□ -1.55
SATB2Q9UPW6 AC006335.2-201ENST00000437993 330 ntBASIC5.39□□□□□ -1.55
SATB2Q9UPW6 AC073072.2-201ENST00000447425 348 ntBASIC5.39□□□□□ -1.55
SATB2Q9UPW6 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.39□□□□□ -1.55
SATB2Q9UPW6 RPL12P39-201ENST00000455456 496 ntBASIC5.39□□□□□ -1.55
SATB2Q9UPW6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms