Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 AC095055.1-201ENST00000603472 1113 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 AP005432.2-201ENST00000608162 586 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 RPSAP73-201ENST00000614820 330 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 SAMMSON-227ENST00000642114 1199 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 EI24P3-201ENST00000399046 1062 ntBASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 NPM1P4-201ENST00000414095 812 ntBASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 RPL7AP61-201ENST00000443410 636 ntBASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 AC009127.1-201ENST00000467090 155 ntBASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 FTH1P11-201ENST00000517577 551 ntBASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 IGKV2-18-201ENST00000522607 343 ntBASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 AC073869.10-201ENST00000642016 354 ntBASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 AC026523.2-201ENST00000625039 7739 ntBASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
VPS29Q9UBQ0 PANDAR-201ENST00000629595 1506 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 OR56A4-201ENST00000330728 1209 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 SNORA17.1-201ENST00000362945 126 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 RN7SKP162-201ENST00000363605 345 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 RNU1-43P-201ENST00000365052 165 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 TRAV35-201ENST00000390462 330 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 U3.25-201ENST00000391209 220 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 RPL35AP24-201ENST00000413846 330 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 RPL12P11-201ENST00000439970 501 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 AC011225.1-201ENST00000457751 369 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 RN7SL174P-201ENST00000475578 289 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 AC073073.1-201ENST00000493920 463 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 AC024558.1-201ENST00000505008 528 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 IGLVIV-64-201ENST00000518581 301 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 IGKV3D-34-201ENST00000522638 302 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 AL512310.9-201ENST00000553311 948 ntBASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS29Q9UBQ0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 AL353625.1-202ENST00000366273 571 ntBASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 AC211486.3-201ENST00000412694 621 ntBASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms