Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 FO393422.1-201ENST00000603908 708 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
VAPAQ9P0L0 AC007996.1-201ENST00000620414 2821 ntBASIC4.84□□□□□ -1.63
VAPAQ9P0L0 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
VAPAQ9P0L0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.84□□□□□ -1.64
VAPAQ9P0L0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
VAPAQ9P0L0 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.84□□□□□ -1.64
VAPAQ9P0L0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AC092111.2-201ENST00000611627 1414 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AL929601.4-201ENST00000613011 1341 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 RNU1-77P-201ENST00000390868 162 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 RNU1-149P-201ENST00000390870 161 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AC007068.1-201ENST00000396690 844 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 VN1R12P-201ENST00000403778 876 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AL390774.1-201ENST00000411924 246 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AL591623.2-201ENST00000449978 222 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AC091180.1-201ENST00000462104 372 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 NDUFA5P5-201ENST00000468361 342 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AC100832.1-201ENST00000471945 383 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 SIAH1P1-201ENST00000479411 923 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 RN7SL447P-201ENST00000494711 245 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 RFPL4AP3-201ENST00000515267 345 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 MIR8080-201ENST00000622224 89 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 CYP4F35P-202ENST00000636121 390 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 AC074101.1-201ENST00000637861 241 ntBASIC4.83□□□□□ -1.64
VAPAQ9P0L0 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VAPAQ9P0L0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 SMG1P4-204ENST00000523028 4131 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 RNU4-44P-201ENST00000363050 141 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 RN7SKP124-201ENST00000364730 341 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 SNORA2.3-201ENST00000383920 135 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AC005522.1-201ENST00000395416 346 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AL391422.1-201ENST00000402155 436 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 SDHDP6-201ENST00000414693 480 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 IPPKP1-201ENST00000422501 768 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AL034379.1-201ENST00000423216 253 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 RPS4XP16-201ENST00000427198 791 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 KCTD9P1-201ENST00000430462 1167 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 RPL23AP19-201ENST00000436229 369 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AC073109.1-201ENST00000445066 978 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 RPL7P45-201ENST00000455851 743 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 TPT1P1-201ENST00000458495 518 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AC084754.1-201ENST00000463466 464 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 RN7SL441P-201ENST00000492388 296 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 RNA5SP303-201ENST00000516192 130 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AC112191.2-201ENST00000522428 333 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AL512310.9-201ENST00000553311 948 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 NDUFB4P11-201ENST00000560510 395 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AC116553.2-201ENST00000564203 463 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AC005726.4-201ENST00000582858 458 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 RN7SL435P-201ENST00000584418 282 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms