Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 RN7SKP113-201ENST00000363891 295 ntBASIC5.1□□□□□ -1.59
TREX1Q9NSU2 RNU1-43P-201ENST00000365052 165 ntBASIC5.1□□□□□ -1.59
TREX1Q9NSU2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 RN7SKP206-201ENST00000410823 293 ntBASIC5.1□□□□□ -1.59
TREX1Q9NSU2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 RPL35AP21-201ENST00000437667 333 ntBASIC5.1□□□□□ -1.59
TREX1Q9NSU2 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 AC091180.1-201ENST00000462104 372 ntBASIC5.1□□□□□ -1.59
TREX1Q9NSU2 RN7SL443P-201ENST00000464331 290 ntBASIC5.1□□□□□ -1.59
TREX1Q9NSU2 COPS8P2-201ENST00000473228 627 ntBASIC5.1□□□□□ -1.59
TREX1Q9NSU2 AC117394.1-201ENST00000477323 567 ntBASIC5.1□□□□□ -1.59
TREX1Q9NSU2 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 COX6B1P2-201ENST00000489624 230 ntBASIC5.1□□□□□ -1.59
TREX1Q9NSU2 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 ATP5LP3-201ENST00000514223 304 ntBASIC5.1□□□□□ -1.59
TREX1Q9NSU2 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 AL358913.1-201ENST00000554342 121 ntBASIC5.1□□□□□ -1.59
TREX1Q9NSU2 NDUFB4P11-201ENST00000560510 395 ntBASIC5.1□□□□□ -1.59
TREX1Q9NSU2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 AC006363.1-201ENST00000603806 463 ntBASIC5.1□□□□□ -1.59
TREX1Q9NSU2 OR51C1P-201ENST00000608504 942 ntBASIC5.1□□□□□ -1.59
TREX1Q9NSU2 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.1□□□□□ -1.59
TREX1Q9NSU2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 AC093909.5-201ENST00000621839 1799 ntBASIC5.09□□□□□ -1.59
TREX1Q9NSU2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 RN7SKP114-201ENST00000410327 279 ntBASIC5.09□□□□□ -1.59
TREX1Q9NSU2 SNORA79B-201ENST00000410557 148 ntBASIC5.09□□□□□ -1.59
TREX1Q9NSU2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 AC004980.3-201ENST00000447046 365 ntBASIC5.09□□□□□ -1.59
TREX1Q9NSU2 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 MRPL35P2-201ENST00000448009 511 ntBASIC5.09□□□□□ -1.59
TREX1Q9NSU2 BTF3P6-201ENST00000448054 499 ntBASIC5.09□□□□□ -1.59
TREX1Q9NSU2 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 AC073073.1-201ENST00000493920 463 ntBASIC5.09□□□□□ -1.59
TREX1Q9NSU2 AC106872.4-201ENST00000510050 523 ntBASIC5.09□□□□□ -1.59
TREX1Q9NSU2 AC105031.1-201ENST00000518550 476 ntBASIC5.09□□□□□ -1.59
TREX1Q9NSU2 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 AC116553.2-201ENST00000564203 463 ntBASIC5.09□□□□□ -1.59
TREX1Q9NSU2 AC011840.5-201ENST00000582125 771 ntBASIC5.09□□□□□ -1.59
TREX1Q9NSU2 AL512329.2-201ENST00000607350 548 ntBASIC5.09□□□□□ -1.59
TREX1Q9NSU2 SAMMSON-227ENST00000642114 1199 ntBASIC5.09□□□□□ -1.59
TREX1Q9NSU2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
TREX1Q9NSU2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
TREX1Q9NSU2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
TREX1Q9NSU2 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.09□□□□□ -1.6
TREX1Q9NSU2 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
TREX1Q9NSU2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TREX1Q9NSU2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TREX1Q9NSU2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TREX1Q9NSU2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.08□□□□□ -1.6
TREX1Q9NSU2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TREX1Q9NSU2 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TREX1Q9NSU2 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
TREX1Q9NSU2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
TREX1Q9NSU2 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TREX1Q9NSU2 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TREX1Q9NSU2 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.08□□□□□ -1.6
TREX1Q9NSU2 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TREX1Q9NSU2 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TREX1Q9NSU2 AL391361.1-201ENST00000405580 489 ntBASIC5.08□□□□□ -1.6
TREX1Q9NSU2 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms