Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
PDLIM7Q9NR12 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PDLIM7Q9NR12 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
PDLIM7Q9NR12 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PDLIM7Q9NR12 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PDLIM7Q9NR12 AC137056.2-201ENST00000624055 1958 ntBASIC6.77□□□□□ -1.33
PDLIM7Q9NR12 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.77□□□□□ -1.33
PDLIM7Q9NR12 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
PDLIM7Q9NR12 AC235565.1-201ENST00000456962 1325 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 RNU6-1005P-201ENST00000384519 107 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 GSTA8P-201ENST00000404253 637 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AL355379.1-201ENST00000405542 640 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 RNU4-34P-201ENST00000410431 124 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 RPL35AP3-201ENST00000414680 288 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 PTP4A1P5-201ENST00000420305 455 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AL160175.1-201ENST00000428124 247 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AC007563.3-201ENST00000433233 371 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AC000041.1-201ENST00000439655 175 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 PTENP1-201ENST00000447117 1215 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 RPL23AP60-201ENST00000450011 454 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 RPS27AP8-201ENST00000452665 445 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 Z95152.1-201ENST00000453556 656 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AC092754.2-201ENST00000463506 460 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 PFN1P6-201ENST00000476786 399 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 RPS4XP6-201ENST00000477670 797 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 SIAH1P1-201ENST00000479411 923 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AC026414.1-201ENST00000504046 698 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 DPRXP4-201ENST00000578053 568 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AC095055.1-201ENST00000603472 1113 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AC107304.1-201ENST00000604229 296 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AL121895.2-201ENST00000619558 447 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AC025263.3-201ENST00000622965 1396 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 ZNF90P1-201ENST00000480493 1951 ntBASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDLIM7Q9NR12 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 CCAT2-201ENST00000630920 1752 ntBASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 AC016251.2-201ENST00000623393 3089 ntBASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 SNORA64.1-201ENST00000362600 132 ntBASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 RNU6-252P-201ENST00000363232 107 ntBASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 RNA5SP514-201ENST00000363717 111 ntBASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 RNU6-171P-201ENST00000384354 107 ntBASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 AP003170.5-201ENST00000397185 335 ntBASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 AC233289.1-201ENST00000403700 508 ntBASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 AC007568.1-201ENST00000422912 471 ntBASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.75□□□□□ -1.33
PDLIM7Q9NR12 NPM1P33-201ENST00000438918 872 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 462 ms