Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 AC073869.7-201ENST00000640874 297 ntBASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 OR52B5P-202ENST00000641118 1110 ntBASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 AL590763.1-201ENST00000398297 1545 ntBASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.82□□□□□ -1.48
CCSER1Q9C0I3 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 CASC19-221ENST00000641309 1382 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 PANDAR-201ENST00000629595 1506 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 RNU6-171P-201ENST00000384354 107 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AL390316.1-201ENST00000406279 553 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 RN7SKP16-201ENST00000410180 299 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 RPL35AP24-201ENST00000413846 330 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 BMS1P13-201ENST00000417301 885 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 RPL7AP61-201ENST00000443410 636 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 OR52Y1P-201ENST00000452418 828 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC074386.1-201ENST00000476560 767 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC005412.2-201ENST00000492004 341 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC024940.3-201ENST00000538551 316 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC234775.3-201ENST00000564612 656 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC018695.5-201ENST00000605872 315 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AC138627.1-204ENST00000641894 765 ntBASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCSER1Q9C0I3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 AC011503.2-201ENST00000594230 1500 ntBASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 CNOT7P2-201ENST00000441051 832 ntBASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 AL606490.1-201ENST00000452266 765 ntBASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 RN7SL799P-201ENST00000475891 298 ntBASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 RPS4XP1-201ENST00000482189 787 ntBASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 RN7SL30P-201ENST00000488416 306 ntBASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 NIFKP7-201ENST00000503365 834 ntBASIC5.8□□□□□ -1.48
CCSER1Q9C0I3 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms