Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 AC092747.4-201ENST00000620519 1861 ntBASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 U3.3-201ENST00000362986 216 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 OR1L6-202ENST00000373684 1044 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 MIR105-1-201ENST00000385222 81 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 RN7SKP16-201ENST00000410180 299 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 COX5BP7-201ENST00000414780 274 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC092017.2-201ENST00000427600 362 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 TRY2P-201ENST00000448860 689 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC021660.1-201ENST00000465006 554 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC097484.1-201ENST00000471148 389 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 RPS29P22-201ENST00000472363 168 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC090142.2-201ENST00000483263 416 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 RPL7P41-201ENST00000485823 957 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC006427.1-201ENST00000514359 712 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC010487.1-201ENST00000594408 1172 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC009597.2-201ENST00000604659 592 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AL162431.4-201ENST00000604674 411 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC087783.2-201ENST00000605070 562 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC005084.1-201ENST00000605160 304 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC087385.3-201ENST00000620477 187 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC091932.2-201ENST00000623014 291 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC112694.2-201ENST00000623697 768 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AL353662.3-201ENST00000625131 237 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC006210.2-201ENST00000367074 1545 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AP001284.1-201ENST00000528393 2118 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 THAP12P4-201ENST00000528321 2266 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AP005435.3-201ENST00000531260 3198 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC007618.1-201ENST00000366455 732 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC090018.1-201ENST00000434369 367 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AL161722.2-201ENST00000434731 981 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC006466.1-201ENST00000438721 289 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AC092647.2-201ENST00000452998 253 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 ENPP7P11-201ENST00000505915 627 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 BRD9P1-201ENST00000529855 560 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
RPAP1Q9BWH6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 TCP11X1-202ENST00000622971 1372 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 AC004656.1-201ENST00000568479 4951 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 AC022893.2-201ENST00000564832 3296 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 RNVU1-6-201ENST00000364688 164 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 MIR589-201ENST00000385238 99 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 AL358178.1-201ENST00000407698 397 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 AC046176.1-201ENST00000435260 1170 ntBASIC6.3□□□□□ -1.4
RPAP1Q9BWH6 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms