Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU7-179P-201ENST00000516608 68 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 RNA5SP422-201ENST00000516778 111 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 HLA-P-207ENST00000568192 747 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 AL390240.1-201ENST00000612950 384 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC083806.3-201ENST00000614016 455 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 CASC19-232ENST00000641480 1244 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 HRH4-201ENST00000256906 3668 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC106800.1-201ENST00000501221 1362 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 AC006058.1-201ENST00000568686 5067 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 PARP4P1-201ENST00000435945 2337 ntBASIC7.32□□□□□ -1.24
USB1Q9BQ65 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
USB1Q9BQ65 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USB1Q9BQ65 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 MTND5P10-201ENST00000603719 1809 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC097504.1-201ENST00000515103 2415 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC135731.2-201ENST00000603029 2098 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 Y_RNA.373-201ENST00000365600 103 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 DEFB109C-201ENST00000382575 264 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 DEFB109B-201ENST00000382656 264 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 RNU6-1013P-201ENST00000384180 107 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 SNORD3H-201ENST00000384486 214 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 RNU6-1151P-201ENST00000384684 107 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 MIR514A2-201ENST00000385131 88 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 MIR514A3-201ENST00000385132 88 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC078974.1-201ENST00000411597 223 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 EIF3IP1-201ENST00000433048 967 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 FUNDC2P4-201ENST00000441207 421 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 IGKV1D-35-201ENST00000442736 271 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC107399.1-201ENST00000451226 265 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC119744.1-201ENST00000454746 1715 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 APOOP2-201ENST00000461561 539 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 RPL29P23-201ENST00000486188 442 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC106872.2-201ENST00000494303 480 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 Y_RNA.682-201ENST00000516457 100 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 RPL7P20-201ENST00000520308 745 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 MTND6P20-201ENST00000522986 418 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 OR4T1P-201ENST00000554933 911 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms