Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 RNU1-46P-201ENST00000384425 164 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 Y_RNA.516-201ENST00000384541 124 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 ERHP2-201ENST00000402323 299 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 RN7SKP273-201ENST00000411392 314 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 XKRYP4-201ENST00000414395 483 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC098592.1-201ENST00000419352 333 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC066692.1-201ENST00000421721 457 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 CYCSP52-201ENST00000422857 310 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC073109.1-201ENST00000445066 978 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 HMGB1P48-201ENST00000446155 598 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 XKRYP5-201ENST00000449659 483 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 RPS26P39-201ENST00000469206 341 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 MTAPP1-201ENST00000489154 819 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC008565.1-201ENST00000509046 885 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 OR5H7P-201ENST00000514084 930 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 SEPT10P1-201ENST00000517342 1162 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 OR11H3P-201ENST00000554547 982 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AC079089.3-201ENST00000603094 673 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 LARP7P1-201ENST00000605576 316 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AL359513.1-201ENST00000614364 557 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AL133370.2-201ENST00000619934 439 ntBASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNGAP1Q96PV0 ZNF849P-201ENST00000594711 1566 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC112243.1-201ENST00000623949 3851 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC089998.1-201ENST00000548575 3141 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC006042.3-201ENST00000454684 1469 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC087752.1-201ENST00000391360 558 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 USP9YP33-201ENST00000412220 421 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 NPM1P11-201ENST00000417106 855 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC007394.1-201ENST00000421941 531 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 OFD1P13Y-201ENST00000431179 1232 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 GTF2IP7-202ENST00000436677 309 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AL139156.3-201ENST00000454802 394 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC023194.2-201ENST00000465398 406 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC022206.1-201ENST00000495947 347 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 NDUFA5P2-201ENST00000519723 344 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC244502.2-201ENST00000543361 851 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC079905.1-201ENST00000549280 475 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 CCNG2P1-201ENST00000549521 1000 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC012435.1-202ENST00000568772 240 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AL359704.2-201ENST00000604335 521 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC138749.5-201ENST00000611461 208 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC105227.2-201ENST00000615075 605 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AL445647.2-201ENST00000615170 130 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms