Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC069304.1-201ENST00000491593 704 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 RN7SL612P-201ENST00000497704 295 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC098799.1-201ENST00000504752 800 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 RNU6-1308P-201ENST00000516817 103 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC079905.1-201ENST00000549280 475 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AL390334.1-201ENST00000556395 450 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 DPRXP4-201ENST00000578053 568 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC108738.1-201ENST00000603703 237 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC015849.2-201ENST00000605738 409 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AL355802.4-201ENST00000607635 548 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 uc_338.7-201ENST00000621834 124 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AP001005.3-201ENST00000622049 129 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC092079.1-201ENST00000558620 1985 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC009501.3-201ENST00000605001 1352 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 RNA5SP241-201ENST00000391326 114 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 RNA5SP498-201ENST00000411342 120 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 TCEA1P3-201ENST00000443005 880 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 RN7SL583P-201ENST00000475692 287 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AL049874.2-201ENST00000492636 288 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AC138866.2-201ENST00000508650 584 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 MTND2P31-201ENST00000512602 616 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AC098976.1-201ENST00000513014 541 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 Y_RNA.667-201ENST00000516212 107 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 RNA5SP438-201ENST00000516561 112 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AC092709.1-201ENST00000521355 1045 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AC125612.1-201ENST00000547580 377 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AC068305.2-201ENST00000550567 1205 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 RN7SL290P-201ENST00000578661 300 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AL139407.1-201ENST00000613826 1175 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AC025016.1-201ENST00000616746 682 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AL359715.4-201ENST00000606629 1436 ntBASIC5.28□□□□□ -1.56
VPS33AQ96AX1 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS33AQ96AX1 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms