Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC092754.1-201ENST00000472975 479 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 CBX1P5-201ENST00000475330 559 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC022336.1-201ENST00000475510 337 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 RN7SL814P-201ENST00000487715 300 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 MTND6P2-201ENST00000512226 524 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 IGLVIV-64-201ENST00000518581 301 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 OR4R2P-201ENST00000530815 597 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC134349.2-201ENST00000535136 910 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC092451.2-201ENST00000538746 658 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 MRPS21P7-201ENST00000566937 238 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC009852.2-201ENST00000567898 485 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC022884.2-201ENST00000578535 580 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC006272.2-201ENST00000594725 163 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC074276.2-201ENST00000619891 348 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 LINC00216-201ENST00000623548 1126 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC097372.4-201ENST00000625025 466 ntBASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SLC44A1Q8WWI5 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SLC44A1Q8WWI5 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SLC44A1Q8WWI5 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SLC44A1Q8WWI5 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.4□□□□□ -1.55
SLC44A1Q8WWI5 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SLC44A1Q8WWI5 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SLC44A1Q8WWI5 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SLC44A1Q8WWI5 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SLC44A1Q8WWI5 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.4□□□□□ -1.55
SLC44A1Q8WWI5 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 BX119321.1-201ENST00000428912 797 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 SNORD46.2-201ENST00000516021 102 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AC019227.1-201ENST00000526902 510 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AP003049.1-201ENST00000529418 457 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 LSM3P2-201ENST00000551246 273 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 IGBP1P1-201ENST00000554337 1009 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AC092121.1-201ENST00000569452 202 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AC012616.1-201ENST00000600294 197 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AC009027.1-201ENST00000604510 479 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 MIR6729-201ENST00000618194 65 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AC253576.2-201ENST00000618815 580 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AC114947.2-201ENST00000565748 2125 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 CASC19-248ENST00000641674 1356 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AC093909.5-201ENST00000621839 1799 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AC104623.2-202ENST00000623477 4002 ntBASIC5.39□□□□□ -1.55
SLC44A1Q8WWI5 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 RNA5SP435-201ENST00000364044 108 ntBASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A1Q8WWI5 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms