Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.18□□□□□ -1.42
SNED1Q8TER0 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNED1Q8TER0 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SNED1Q8TER0 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SNED1Q8TER0 MTND5P12-201ENST00000502851 1449 ntBASIC6.18□□□□□ -1.42
SNED1Q8TER0 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNED1Q8TER0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.18□□□□□ -1.42
SNED1Q8TER0 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNED1Q8TER0 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNED1Q8TER0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNED1Q8TER0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNED1Q8TER0 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNED1Q8TER0 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNED1Q8TER0 OR9G4-201ENST00000302957 984 ntBASIC6.17□□□□□ -1.42
SNED1Q8TER0 RNA5SP479-201ENST00000364858 117 ntBASIC6.17□□□□□ -1.42
SNED1Q8TER0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SNED1Q8TER0 ATP5HP3-201ENST00000396994 486 ntBASIC6.17□□□□□ -1.42
SNED1Q8TER0 AL035696.2-201ENST00000407941 709 ntBASIC6.17□□□□□ -1.42
SNED1Q8TER0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.17□□□□□ -1.42
SNED1Q8TER0 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.17□□□□□ -1.42
SNED1Q8TER0 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.17□□□□□ -1.42
SNED1Q8TER0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.17□□□□□ -1.42
SNED1Q8TER0 TXNP5-201ENST00000441043 315 ntBASIC6.17□□□□□ -1.42
SNED1Q8TER0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.17□□□□□ -1.42
SNED1Q8TER0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.17□□□□□ -1.42
SNED1Q8TER0 RN7SL244P-201ENST00000493405 297 ntBASIC6.17□□□□□ -1.42
SNED1Q8TER0 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.17□□□□□ -1.42
SNED1Q8TER0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.17□□□□□ -1.42
SNED1Q8TER0 AP001880.2-201ENST00000538233 448 ntBASIC6.17□□□□□ -1.42
SNED1Q8TER0 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.17□□□□□ -1.42
SNED1Q8TER0 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.17□□□□□ -1.42
SNED1Q8TER0 AP001521.2-201ENST00000608772 546 ntBASIC6.17□□□□□ -1.42
SNED1Q8TER0 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.17□□□□□ -1.42
SNED1Q8TER0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.17□□□□□ -1.42
SNED1Q8TER0 AC079298.1-201ENST00000625026 1619 ntBASIC6.17□□□□□ -1.42
SNED1Q8TER0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SNED1Q8TER0 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SNED1Q8TER0 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNED1Q8TER0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNED1Q8TER0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SNED1Q8TER0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SNED1Q8TER0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNED1Q8TER0 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNED1Q8TER0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNED1Q8TER0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNED1Q8TER0 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 Y_RNA.126-201ENST00000363382 111 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 SNORA70.6-201ENST00000383934 134 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 Z97832.1-201ENST00000402490 328 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 AC005154.2-201ENST00000438110 379 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 OR52A4P-201ENST00000472867 958 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 AC134698.5-201ENST00000519444 336 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 MIR4715-201ENST00000584117 79 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 AL590392.1-201ENST00000604960 446 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 AL352984.2-202ENST00000613699 155 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 CR381572.2-201ENST00000624852 397 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNED1Q8TER0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNED1Q8TER0 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNED1Q8TER0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNED1Q8TER0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNED1Q8TER0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNED1Q8TER0 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 AL049697.2-201ENST00000403708 294 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 AL158827.1-201ENST00000416300 391 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 GTF2IP2-201ENST00000424290 697 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 AC012497.1-201ENST00000429392 575 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 EIF2S2P2-201ENST00000447161 982 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 AC010326.1-201ENST00000462726 602 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 PSAT1P4-201ENST00000466500 526 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 RN7SL319P-201ENST00000480656 221 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.16□□□□□ -1.42
SNED1Q8TER0 IMPA1P1-201ENST00000510718 842 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 SUMO2P19-201ENST00000518920 295 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNED1Q8TER0 AC019322.1-201ENST00000571869 389 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 EIF1P5-201ENST00000585002 234 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 AL445423.1-201ENST00000609941 536 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 AL138960.1-201ENST00000613838 513 ntBASIC6.16□□□□□ -1.42
SNED1Q8TER0 OR52H1-202ENST00000641796 1061 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms