Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AC002069.1-201ENST00000429649 1159 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 RPL7P45-201ENST00000455851 743 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 RN7SL717P-201ENST00000478343 297 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 RN7SL547P-201ENST00000490793 290 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AL049874.2-201ENST00000492636 288 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 RN7SL447P-201ENST00000494711 245 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 RNA5SP373-201ENST00000517271 95 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AC084759.1-201ENST00000561168 290 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AC127024.5-201ENST00000580085 462 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 MIR3936-201ENST00000584304 110 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 PRPF19P1-201ENST00000584766 898 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AC008814.1-201ENST00000603797 406 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AL589674.2-201ENST00000604304 337 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AC009597.2-201ENST00000604659 592 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AL034374.2-201ENST00000605281 548 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 AC027228.2-201ENST00000567141 2154 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 HSPA8P15-201ENST00000401676 786 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 COX5BP7-201ENST00000414780 274 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 CYCSP12-201ENST00000437729 300 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 RPSAP39-201ENST00000467439 883 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 RPL7P6-201ENST00000480903 738 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 NPM1P29-201ENST00000483112 803 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 AC126177.5-201ENST00000549599 178 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 RPL10P14-201ENST00000565265 298 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 AC007204.2-201ENST00000615022 616 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 WBP1LP8-201ENST00000617401 327 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 AP001005.3-201ENST00000622049 129 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 AL606537.1-201ENST00000607258 2011 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 SCN1A-220ENST00000641603 12506 ntBASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF439Q8NDP4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF439Q8NDP4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF439Q8NDP4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF439Q8NDP4 OR55B1P-203ENST00000641518 2602 ntBASIC4.31□□□□□ -1.72
ZNF439Q8NDP4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF439Q8NDP4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
ZNF439Q8NDP4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF439Q8NDP4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms