Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 BX005214.3-202ENST00000619809 325 ntBASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 AP001052.1-201ENST00000626421 99 ntBASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 TEX41-279ENST00000629149 609 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 AC027279.1-201ENST00000568885 4284 ntBASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 ZNF652P1-201ENST00000442420 1309 ntBASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CCDC71LQ8N9Z2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 HSPA8P18-201ENST00000439846 1928 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 TMSB4XP2-201ENST00000335179 210 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 RNA5SP131-201ENST00000365452 119 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 RNU6-178P-201ENST00000384631 104 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 OR7E101P-201ENST00000400428 513 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AL078599.1-201ENST00000402075 293 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 RPL10P10-201ENST00000403509 664 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AL359885.1-201ENST00000415786 903 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 OR6D1P-201ENST00000436165 939 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AL450996.1-201ENST00000445574 1202 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 BX842559.2-201ENST00000451418 605 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 C1DP3-201ENST00000455013 423 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 MTND6P32-201ENST00000457611 483 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 ACA64.1-201ENST00000459171 127 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 RNA5SP103-201ENST00000459503 118 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 MTND3P6-201ENST00000485242 339 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 NACAP5-201ENST00000509863 636 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 RNA5SP228-201ENST00000516232 133 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 NPM1P52-201ENST00000518264 846 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 MRPS16P1-201ENST00000523462 412 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AC090022.1-201ENST00000546569 311 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AC121758.1-202ENST00000556917 658 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AC005341.1-201ENST00000571086 708 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AC009597.2-201ENST00000604659 592 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AC091167.5-201ENST00000605689 894 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AC037198.3-201ENST00000616754 526 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AC131238.1-201ENST00000617135 328 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AL731532.2-201ENST00000623542 1953 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 AC104966.1-201ENST00000467010 1464 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 SSXP3-201ENST00000442971 1300 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 MTCO1P8-201ENST00000416914 1523 ntBASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CCDC71LQ8N9Z2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC71LQ8N9Z2 AC107068.1-201ENST00000563286 4218 ntBASIC4.4□□□□□ -1.7
CCDC71LQ8N9Z2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC71LQ8N9Z2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC71LQ8N9Z2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CCDC71LQ8N9Z2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC005294.1-201ENST00000355509 281 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 RNU6-697P-201ENST00000363348 107 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 RN7SKP250-201ENST00000363924 321 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 RNU1-74P-201ENST00000384108 171 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 MIR191-201ENST00000384873 92 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AL034417.1-201ENST00000399343 800 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 HSPA8P15-201ENST00000401676 786 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 RN7SKP86-201ENST00000410454 332 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AC073136.2-201ENST00000417282 849 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 AL161722.2-201ENST00000434731 981 ntBASIC4.4□□□□□ -1.71
CCDC71LQ8N9Z2 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 487.4 ms