Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 Y_RNA.192-201ENST00000363977 102 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 Y_RNA.560-201ENST00000384689 102 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 RN7SKP144-201ENST00000411108 279 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 RNA5SP115-201ENST00000411160 107 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AC004022.2-201ENST00000413824 193 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AC098592.1-201ENST00000419352 333 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 RPL21P43-201ENST00000425440 472 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AC112492.2-201ENST00000432774 1030 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 NMNAT1P2-201ENST00000435192 860 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 PA2G4P6-201ENST00000438325 1197 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 HMGB1P7-201ENST00000450921 612 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 NDUFA12P1-201ENST00000455914 406 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 PSMA2P2-201ENST00000504319 686 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 BTG4P1-201ENST00000510421 183 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 ZNF519P4-201ENST00000514008 125 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 MTCO2P32-201ENST00000514865 403 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 RNA5SP206-201ENST00000516703 121 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AC087360.1-201ENST00000518788 616 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AC020937.1-201ENST00000519677 1013 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AP000662.1-201ENST00000530952 487 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AP001804.2-201ENST00000533932 910 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 HIGD1AP17-201ENST00000554576 276 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AL845552.1-201ENST00000556820 323 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 RBM22P12-201ENST00000567098 1255 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AC002400.1-201ENST00000569310 726 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 MIR5708-201ENST00000579723 85 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AL031985.2-201ENST00000600955 480 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 VN1R74P-201ENST00000613259 503 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 NCOA4P2-201ENST00000340589 1813 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AC020656.2-201ENST00000613291 5309 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AC011455.2-201ENST00000599320 3336 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 AL136984.1-201ENST00000607611 1893 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 AC023490.2-201ENST00000359859 470 ntBASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 RNA5SP333-201ENST00000363466 118 ntBASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 snoZ40.1-201ENST00000364540 72 ntBASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 RNA5SP334-201ENST00000364825 118 ntBASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 OR5H15-201ENST00000383696 930 ntBASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 CHMP1B2P-201ENST00000399581 597 ntBASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 GCNT1P4-201ENST00000404096 329 ntBASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 RNU6-757P-201ENST00000410334 100 ntBASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 OFD1P11Y-201ENST00000418213 1177 ntBASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 AL138899.2-201ENST00000439139 499 ntBASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 PCNPP2-201ENST00000441651 455 ntBASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 AL035407.2-201ENST00000454090 378 ntBASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
TRIM48Q8IWZ4 NPM1P27-201ENST00000502784 830 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms