Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 STX3-208ENST00000641815 3236 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 RNA5SP319-201ENST00000362768 119 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 RNA5SP234-201ENST00000363916 119 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AL078599.1-201ENST00000402075 293 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 CFL1P1-202ENST00000432948 411 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 RPL35AP21-201ENST00000437667 333 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 NPM1P19-201ENST00000450070 712 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AL035090.1-201ENST00000454835 332 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 TPT1P1-201ENST00000458495 518 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 RNA5SP103-201ENST00000459503 118 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 RN7SL189P-201ENST00000468631 289 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AC005341.1-201ENST00000571086 708 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 RN7SL708P-201ENST00000580952 299 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AC007448.1-201ENST00000582714 234 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 NPM1P45-201ENST00000583151 559 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 RN7SL435P-201ENST00000584418 282 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AC012616.1-201ENST00000600294 197 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AL162431.4-201ENST00000604674 411 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AC018695.5-201ENST00000605872 315 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AC005840.5-201ENST00000619166 599 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AC132068.1-201ENST00000623805 459 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 ZNF652P1-201ENST00000442420 1309 ntBASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.19□□□□□ -1.58
CRLF3Q8IUI8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 RNU4-2-201ENST00000365668 141 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 HSPA8P15-201ENST00000401676 786 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 GABARAPL3-201ENST00000412799 354 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AL355433.1-201ENST00000422804 300 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 OR2AH1P-201ENST00000425717 928 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 RPL12P18-201ENST00000437175 325 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 MRPL35P2-201ENST00000448009 511 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 RN7SL51P-201ENST00000468230 285 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AC091544.1-201ENST00000484702 348 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 HMGB3P16-201ENST00000508037 287 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AP004607.2-201ENST00000533949 322 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 SUGT1P3-202ENST00000604259 383 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AC010245.2-201ENST00000606908 1167 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AL359513.1-201ENST00000614364 557 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 BNIP3P41-202ENST00000616656 861 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 AC015914.2-201ENST00000618167 288 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 TET1P1-201ENST00000426627 2301 ntBASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CRLF3Q8IUI8 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms