Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
NHLRC1Q6VVB1 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AL391422.1-201ENST00000402155 436 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 GAPDHP42-201ENST00000406848 981 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 NPM1P40-201ENST00000412758 733 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 NDUFA5P10-201ENST00000432147 357 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AL389925.1-201ENST00000432257 728 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 FHP1-201ENST00000442741 703 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 NPM1P39-201ENST00000449818 867 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AC007998.1-201ENST00000474156 672 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 SUMO1P1-201ENST00000497904 306 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AC138866.2-201ENST00000508650 584 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 CYCSP22-201ENST00000517555 339 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 PMS2P3-207ENST00000529061 717 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AC079600.1-201ENST00000550326 297 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 IGBP1P1-201ENST00000554337 1009 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AL139124.1-201ENST00000609123 421 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AC138965.3-201ENST00000623875 498 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AP002967.1-201ENST00000624203 539 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 YES1P1-201ENST00000418510 1628 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AL359715.4-201ENST00000606629 1436 ntBASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NHLRC1Q6VVB1 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AC104964.3-201ENST00000606115 2860 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 RNA5SP46-201ENST00000362370 120 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 RN7SKP15-201ENST00000364742 309 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 CHMP1B2P-201ENST00000399581 597 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 HYALP1-201ENST00000417674 1279 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 RPS3P2-201ENST00000421346 701 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 BX119321.1-201ENST00000428912 797 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 OR6D1P-201ENST00000436165 939 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AC002504.1-201ENST00000438281 691 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AL450996.1-201ENST00000445574 1202 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 RN7SL583P-201ENST00000475692 287 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AC090568.1-201ENST00000509499 856 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 RNA5SP230-201ENST00000517039 122 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AC020937.1-201ENST00000519677 1013 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AC087272.1-201ENST00000523624 533 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 OR4A17P-201ENST00000526032 904 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AC079064.1-201ENST00000528365 362 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 H3F3BP2-201ENST00000583907 357 ntBASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.95□□□□□ -1.62
NHLRC1Q6VVB1 AC010487.1-201ENST00000594408 1172 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms