Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5□□□□□ -1.61
RIF1Q5UIP0 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
RIF1Q5UIP0 MIR105-1-201ENST00000385222 81 ntBASIC5□□□□□ -1.61
RIF1Q5UIP0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5□□□□□ -1.61
RIF1Q5UIP0 RNA5SP251-201ENST00000410614 137 ntBASIC5□□□□□ -1.61
RIF1Q5UIP0 RPEP3-201ENST00000425462 676 ntBASIC5□□□□□ -1.61
RIF1Q5UIP0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5□□□□□ -1.61
RIF1Q5UIP0 AC016831.4-201ENST00000438302 307 ntBASIC5□□□□□ -1.61
RIF1Q5UIP0 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5□□□□□ -1.61
RIF1Q5UIP0 RN7SL244P-201ENST00000493405 297 ntBASIC5□□□□□ -1.61
RIF1Q5UIP0 RNU1-45P-201ENST00000517191 141 ntBASIC5□□□□□ -1.61
RIF1Q5UIP0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5□□□□□ -1.61
RIF1Q5UIP0 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5□□□□□ -1.61
RIF1Q5UIP0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5□□□□□ -1.61
RIF1Q5UIP0 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RIF1Q5UIP0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5□□□□□ -1.61
RIF1Q5UIP0 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
RIF1Q5UIP0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5□□□□□ -1.61
RIF1Q5UIP0 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RIF1Q5UIP0 AC104162.1-201ENST00000430831 2382 ntBASIC5□□□□□ -1.61
RIF1Q5UIP0 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5□□□□□ -1.61
RIF1Q5UIP0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
RIF1Q5UIP0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RIF1Q5UIP0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RIF1Q5UIP0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
RIF1Q5UIP0 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC5□□□□□ -1.61
RIF1Q5UIP0 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RIF1Q5UIP0 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5□□□□□ -1.61
RIF1Q5UIP0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5□□□□□ -1.61
RIF1Q5UIP0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RIF1Q5UIP0 GCA-203ENST00000429691 824 ntTSL 3 BASIC5□□□□□ -1.61
RIF1Q5UIP0 KRT8P51-201ENST00000438938 274 ntBASIC5□□□□□ -1.61
RIF1Q5UIP0 MRPL35P2-201ENST00000448009 511 ntBASIC5□□□□□ -1.61
RIF1Q5UIP0 SCARNA20.4-201ENST00000516969 131 ntBASIC5□□□□□ -1.61
RIF1Q5UIP0 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5□□□□□ -1.61
RIF1Q5UIP0 MIR4420-201ENST00000583944 77 ntBASIC5□□□□□ -1.61
RIF1Q5UIP0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5□□□□□ -1.61
RIF1Q5UIP0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5□□□□□ -1.61
RIF1Q5UIP0 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC5□□□□□ -1.61
RIF1Q5UIP0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
RIF1Q5UIP0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RIF1Q5UIP0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 OR4K17-201ENST00000315543 1032 ntBASIC4.99□□□□□ -1.61
RIF1Q5UIP0 RNU6-525P-201ENST00000363685 104 ntBASIC4.99□□□□□ -1.61
RIF1Q5UIP0 AL607077.1-201ENST00000401718 499 ntBASIC4.99□□□□□ -1.61
RIF1Q5UIP0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 AL161722.2-201ENST00000434731 981 ntBASIC4.99□□□□□ -1.61
RIF1Q5UIP0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 AC092754.1-201ENST00000472975 479 ntBASIC4.99□□□□□ -1.61
RIF1Q5UIP0 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 AC012339.2-201ENST00000523996 453 ntBASIC4.99□□□□□ -1.61
RIF1Q5UIP0 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 AL450345.1-202ENST00000605741 3881 ntBASIC4.99□□□□□ -1.61
RIF1Q5UIP0 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 DPY19L1P1-201ENST00000417811 2594 ntBASIC4.99□□□□□ -1.61
RIF1Q5UIP0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 U3.3-201ENST00000362986 216 ntBASIC4.99□□□□□ -1.61
RIF1Q5UIP0 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 CYCSP34-201ENST00000458172 304 ntBASIC4.99□□□□□ -1.61
RIF1Q5UIP0 AC091564.1-201ENST00000464563 479 ntBASIC4.99□□□□□ -1.61
RIF1Q5UIP0 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.99□□□□□ -1.61
RIF1Q5UIP0 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 AC007346.2-201ENST00000564816 892 ntBASIC4.99□□□□□ -1.61
RIF1Q5UIP0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.99□□□□□ -1.61
RIF1Q5UIP0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RIF1Q5UIP0 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RIF1Q5UIP0 SMG1P7-201ENST00000565246 2704 ntBASIC4.98□□□□□ -1.61
RIF1Q5UIP0 AC004076.2-201ENST00000620532 3323 ntBASIC4.98□□□□□ -1.61
RIF1Q5UIP0 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RIF1Q5UIP0 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RIF1Q5UIP0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RIF1Q5UIP0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RIF1Q5UIP0 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RIF1Q5UIP0 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.98□□□□□ -1.61
RIF1Q5UIP0 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RIF1Q5UIP0 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.98□□□□□ -1.61
RIF1Q5UIP0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.98□□□□□ -1.61
RIF1Q5UIP0 RPL7P40-201ENST00000481703 745 ntBASIC4.98□□□□□ -1.61
RIF1Q5UIP0 AC026726.1-201ENST00000512859 601 ntBASIC4.98□□□□□ -1.61
RIF1Q5UIP0 SCARNA13-201ENST00000516672 275 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms