Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MIR548Y-201ENST00000582739 110 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.98□□□□□ -1.61
SCN1BQ07699 SUMO2P14-201ENST00000604488 293 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 AC010200.2-201ENST00000605098 235 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 AL450270.1-201ENST00000606160 391 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 AC004775.1-201ENST00000607389 753 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.98□□□□□ -1.61
SCN1BQ07699 uc_338.31-201ENST00000615595 186 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.98□□□□□ -1.61
SCN1BQ07699 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.98□□□□□ -1.61
SCN1BQ07699 AC015908.5-201ENST00000623289 343 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.98□□□□□ -1.61
SCN1BQ07699 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.98□□□□□ -1.61
SCN1BQ07699 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.98□□□□□ -1.61
SCN1BQ07699 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN1BQ07699 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCN1BQ07699 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.98□□□□□ -1.61
SCN1BQ07699 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN1BQ07699 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN1BQ07699 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN1BQ07699 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN1BQ07699 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN1BQ07699 ZNF652P1-201ENST00000442420 1309 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN1BQ07699 RBPJP7-201ENST00000442803 1447 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 RBPJP5-201ENST00000449433 1447 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 AC093225.1-201ENST00000506867 1408 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.97□□□□□ -1.61
SCN1BQ07699 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN1BQ07699 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SCN1BQ07699 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCN1BQ07699 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AL078621.3-201ENST00000623707 2042 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 AC010329.2-201ENST00000595195 2737 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCN1BQ07699 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.97□□□□□ -1.61
SCN1BQ07699 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN1BQ07699 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN1BQ07699 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AC006206.1-201ENST00000544842 3387 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN1BQ07699 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCN1BQ07699 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AC090017.1-201ENST00000548612 1779 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCN1BQ07699 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN1BQ07699 AC017079.1-201ENST00000333650 415 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 AL121886.1-201ENST00000358609 435 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 RBBP4P5-201ENST00000398583 1266 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 RPL21P67-201ENST00000402896 478 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 SETP15-201ENST00000412724 337 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 COX5BP7-201ENST00000414780 274 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AL357078.2-201ENST00000416486 427 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 RPS4XP5-201ENST00000419038 768 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 ARL2BPP3-201ENST00000421226 480 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SCN1BQ07699 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCN1BQ07699 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AC073465.2-201ENST00000440938 498 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN1BQ07699 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN1BQ07699 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AL445466.1-201ENST00000448432 357 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 MTND2P6-201ENST00000455337 1030 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN1BQ07699 TPT1P1-201ENST00000458495 518 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 AC021006.1-201ENST00000489849 553 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCN1BQ07699 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN1BQ07699 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AC105384.2-201ENST00000508433 640 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.97□□□□□ -1.61
SCN1BQ07699 IGLVIV-64-201ENST00000518581 301 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN1BQ07699 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.97□□□□□ -1.61
SCN1BQ07699 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AC040958.1-201ENST00000561102 201 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 LINC00557-201ENST00000563184 1279 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN1BQ07699 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN1BQ07699 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN1BQ07699 AC135178.6-201ENST00000605314 398 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN1BQ07699 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN1BQ07699 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN1BQ07699 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SCN1BQ07699 AL731566.1-201ENST00000620490 1937 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN1BQ07699 AC000374.1-201ENST00000434698 1745 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 AC008627.1-201ENST00000517511 1704 ntBASIC4.97□□□□□ -1.61
SCN1BQ07699 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN1BQ07699 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN1BQ07699 HSPD1P9-201ENST00000420325 1636 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms