Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.93□□□□□ -1.78
CCL20P78556 AC078878.1-201ENST00000539832 958 ntBASIC3.93□□□□□ -1.78
CCL20P78556 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC3.93□□□□□ -1.78
CCL20P78556 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
CCL20P78556 GLRXP2-201ENST00000555594 321 ntBASIC3.93□□□□□ -1.78
CCL20P78556 AC079075.1-201ENST00000559543 878 ntBASIC3.93□□□□□ -1.78
CCL20P78556 ATP5J2P6-201ENST00000565203 266 ntBASIC3.93□□□□□ -1.78
CCL20P78556 AC007066.2-202ENST00000566531 914 ntBASIC3.93□□□□□ -1.78
CCL20P78556 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC3.93□□□□□ -1.78
CCL20P78556 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC3.93□□□□□ -1.78
CCL20P78556 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.93□□□□□ -1.78
CCL20P78556 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.93□□□□□ -1.78
CCL20P78556 AC060766.1-201ENST00000590824 627 ntBASIC3.93□□□□□ -1.78
CCL20P78556 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.93□□□□□ -1.78
CCL20P78556 AP005432.2-201ENST00000608162 586 ntBASIC3.93□□□□□ -1.78
CCL20P78556 uc_338.31-201ENST00000615595 186 ntBASIC3.93□□□□□ -1.78
CCL20P78556 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.93□□□□□ -1.78
CCL20P78556 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.93□□□□□ -1.78
CCL20P78556 AC120338.1-201ENST00000625074 1541 ntBASIC3.93□□□□□ -1.78
CCL20P78556 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.93□□□□□ -1.78
CCL20P78556 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCL20P78556 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.93□□□□□ -1.78
CCL20P78556 AC009643.2-201ENST00000603543 1448 ntBASIC3.93□□□□□ -1.78
CCL20P78556 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CCL20P78556 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCL20P78556 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCL20P78556 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.93□□□□□ -1.78
CCL20P78556 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCL20P78556 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CCL20P78556 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCL20P78556 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CCL20P78556 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CCL20P78556 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCL20P78556 YES1P1-201ENST00000418510 1628 ntBASIC3.92□□□□□ -1.78
CCL20P78556 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 MTCO1P15-201ENST00000529569 1526 ntBASIC3.92□□□□□ -1.78
CCL20P78556 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC3.92□□□□□ -1.78
CCL20P78556 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCL20P78556 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC3.92□□□□□ -1.78
CCL20P78556 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CCL20P78556 SUGT1P2-201ENST00000379452 992 ntBASIC3.92□□□□□ -1.78
CCL20P78556 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCL20P78556 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 HMGB1P20-201ENST00000402555 677 ntBASIC3.92□□□□□ -1.78
CCL20P78556 MEAF6P1-201ENST00000416092 327 ntBASIC3.92□□□□□ -1.78
CCL20P78556 PPP2R2DP1-201ENST00000420526 637 ntBASIC3.92□□□□□ -1.78
CCL20P78556 AC004448.2-201ENST00000422360 586 ntBASIC3.92□□□□□ -1.78
CCL20P78556 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC3.92□□□□□ -1.78
CCL20P78556 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 RPS17P2-201ENST00000461663 408 ntBASIC3.92□□□□□ -1.78
CCL20P78556 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.92□□□□□ -1.78
CCL20P78556 AC106822.1-201ENST00000502647 526 ntBASIC3.92□□□□□ -1.78
CCL20P78556 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CCL20P78556 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.92□□□□□ -1.78
CCL20P78556 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.92□□□□□ -1.78
CCL20P78556 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.92□□□□□ -1.78
CCL20P78556 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC3.92□□□□□ -1.78
CCL20P78556 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC3.92□□□□□ -1.78
CCL20P78556 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.92□□□□□ -1.78
CCL20P78556 AP004607.5-201ENST00000532034 217 ntBASIC3.92□□□□□ -1.78
CCL20P78556 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC3.92□□□□□ -1.78
CCL20P78556 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.92□□□□□ -1.78
CCL20P78556 IGBP1P1-201ENST00000554337 1009 ntBASIC3.92□□□□□ -1.78
CCL20P78556 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC3.92□□□□□ -1.78
CCL20P78556 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.92□□□□□ -1.78
CCL20P78556 RN7SL66P-201ENST00000582099 264 ntBASIC3.92□□□□□ -1.78
CCL20P78556 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 AC012511.1-201ENST00000608140 449 ntBASIC3.92□□□□□ -1.78
CCL20P78556 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC3.92□□□□□ -1.78
CCL20P78556 AC004232.3-201ENST00000622977 525 ntBASIC3.92□□□□□ -1.78
CCL20P78556 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 MAPK10-286ENST00000641208 8747 ntBASIC3.92□□□□□ -1.78
CCL20P78556 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CCL20P78556 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 HCFC2P1-201ENST00000392864 1592 ntBASIC3.92□□□□□ -1.78
CCL20P78556 ECM1P2-201ENST00000503354 1577 ntBASIC3.92□□□□□ -1.78
CCL20P78556 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
CCL20P78556 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CCL20P78556 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.92□□□□□ -1.78
CCL20P78556 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCL20P78556 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC3.91□□□□□ -1.78
CCL20P78556 AL359922.3-201ENST00000624779 1670 ntBASIC3.91□□□□□ -1.78
CCL20P78556 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCL20P78556 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.91□□□□□ -1.78
CCL20P78556 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
CCL20P78556 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CCL20P78556 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CCL20P78556 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms