Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 FBXL21-201ENST00000297158 1305 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CX3CL1P78423 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.62□□□□□ -1.67
CX3CL1P78423 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CL1P78423 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CL1P78423 AC002525.1-201ENST00000624392 1622 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AP001029.2-203ENST00000589795 4910 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
CX3CL1P78423 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
CX3CL1P78423 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CL1P78423 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CL1P78423 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CX3CL1P78423 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CL1P78423 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CX3CL1P78423 RNU6-666P-201ENST00000363499 107 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 RN7SKP78-201ENST00000364711 318 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 RN7SKP28-201ENST00000364770 305 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 ATF1P1-201ENST00000406040 927 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 RN7SKP240-201ENST00000410583 375 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.61□□□□□ -1.67
CX3CL1P78423 LINC01347-201ENST00000417964 355 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AC066692.1-201ENST00000421721 457 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AL035660.1-201ENST00000422041 222 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 HSFY1P1-201ENST00000423928 1178 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.61□□□□□ -1.67
CX3CL1P78423 DPY19L1P2-201ENST00000426647 915 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.61□□□□□ -1.67
CX3CL1P78423 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.61□□□□□ -1.67
CX3CL1P78423 FRG2FP-204ENST00000453982 852 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 MTATP6P14-201ENST00000455189 673 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AC004129.2-201ENST00000457229 287 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.61□□□□□ -1.67
CX3CL1P78423 PFN1P8-201ENST00000497012 543 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.61□□□□□ -1.67
CX3CL1P78423 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.61□□□□□ -1.67
CX3CL1P78423 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.61□□□□□ -1.67
CX3CL1P78423 RN7SKP157-201ENST00000516174 282 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AC060775.1-201ENST00000518241 520 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.61□□□□□ -1.67
CX3CL1P78423 MTND1P6-201ENST00000523621 946 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 TRIM77BP-201ENST00000524985 1119 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 NPM1P35-201ENST00000533043 868 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AC084824.2-201ENST00000548906 345 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AL109741.3-201ENST00000561748 592 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AC122134.1-201ENST00000565664 1104 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 RBM22P12-201ENST00000567098 1255 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.61□□□□□ -1.67
CX3CL1P78423 MIR4260-201ENST00000583107 67 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.61□□□□□ -1.67
CX3CL1P78423 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.61□□□□□ -1.67
CX3CL1P78423 AC090330.1-201ENST00000588646 764 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.61□□□□□ -1.67
CX3CL1P78423 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.61□□□□□ -1.67
CX3CL1P78423 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CL1P78423 AC067773.1-201ENST00000603284 1094 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AC026790.2-201ENST00000606282 430 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AC245100.7-201ENST00000609678 442 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AC015712.7-201ENST00000615211 635 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 RMST_10.1-201ENST00000616309 154 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AC078880.5-201ENST00000617845 421 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CL1P78423 AC010435.1-201ENST00000623353 1177 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AC093875.1-201ENST00000623688 504 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AP003476.1-201ENST00000623984 516 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AC011815.3-201ENST00000624194 473 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.61□□□□□ -1.67
CX3CL1P78423 AL356118.1-201ENST00000635272 1078 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.61□□□□□ -1.67
CX3CL1P78423 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CL1P78423 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CL1P78423 MFSD8-213ENST00000641134 1327 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.61□□□□□ -1.67
CX3CL1P78423 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CL1P78423 TCP11X1-202ENST00000622971 1372 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CL1P78423 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.61□□□□□ -1.67
CX3CL1P78423 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.61□□□□□ -1.67
CX3CL1P78423 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CL1P78423 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CX3CL1P78423 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CL1P78423 MTCO1P15-201ENST00000529569 1526 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CL1P78423 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CX3CL1P78423 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.61□□□□□ -1.67
CX3CL1P78423 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CL1P78423 CASC19-261ENST00000641853 1638 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 MFSD8-239ENST00000641590 2479 ntBASIC4.61□□□□□ -1.67
CX3CL1P78423 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CX3CL1P78423 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CX3CL1P78423 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.6□□□□□ -1.67
CX3CL1P78423 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CX3CL1P78423 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
CX3CL1P78423 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CX3CL1P78423 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms