Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RAE1P78406 AL161901.1-201ENST00000624954 3425 ntBASIC5.41□□□□□ -1.54
RAE1P78406 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RAE1P78406 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RAE1P78406 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.41□□□□□ -1.54
RAE1P78406 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.41□□□□□ -1.54
RAE1P78406 AL121886.1-201ENST00000358609 435 ntBASIC5.41□□□□□ -1.54
RAE1P78406 RN7SKP275-201ENST00000364626 301 ntBASIC5.41□□□□□ -1.54
RAE1P78406 USP9YP21-201ENST00000420603 432 ntBASIC5.41□□□□□ -1.54
RAE1P78406 USP9YP24-201ENST00000434374 697 ntBASIC5.41□□□□□ -1.54
RAE1P78406 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.41□□□□□ -1.54
RAE1P78406 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RAE1P78406 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.41□□□□□ -1.54
RAE1P78406 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.41□□□□□ -1.54
RAE1P78406 USP9YP17-201ENST00000444617 696 ntBASIC5.41□□□□□ -1.54
RAE1P78406 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RAE1P78406 AL096803.2-201ENST00000450032 677 ntBASIC5.41□□□□□ -1.54
RAE1P78406 AC096992.1-201ENST00000459808 709 ntBASIC5.41□□□□□ -1.54
RAE1P78406 RN7SL170P-201ENST00000487098 295 ntBASIC5.41□□□□□ -1.54
RAE1P78406 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RAE1P78406 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.41□□□□□ -1.54
RAE1P78406 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.41□□□□□ -1.54
RAE1P78406 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.41□□□□□ -1.54
RAE1P78406 HPRT1P1-201ENST00000509498 657 ntBASIC5.41□□□□□ -1.54
RAE1P78406 AC112673.1-201ENST00000513168 575 ntBASIC5.41□□□□□ -1.54
RAE1P78406 RN7SKP253-201ENST00000516424 309 ntBASIC5.41□□□□□ -1.54
RAE1P78406 SNORA31.13-201ENST00000516624 135 ntBASIC5.41□□□□□ -1.54
RAE1P78406 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.41□□□□□ -1.54
RAE1P78406 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.41□□□□□ -1.54
RAE1P78406 OR10V3P-201ENST00000525712 725 ntBASIC5.41□□□□□ -1.54
RAE1P78406 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.41□□□□□ -1.54
RAE1P78406 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.41□□□□□ -1.54
RAE1P78406 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.41□□□□□ -1.54
RAE1P78406 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.41□□□□□ -1.54
RAE1P78406 DPPA2P4-201ENST00000563717 878 ntBASIC5.41□□□□□ -1.54
RAE1P78406 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.41□□□□□ -1.54
RAE1P78406 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.41□□□□□ -1.54
RAE1P78406 AC063977.5-201ENST00000601044 974 ntBASIC5.41□□□□□ -1.54
RAE1P78406 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.41□□□□□ -1.54
RAE1P78406 AL352984.2-201ENST00000611153 546 ntBASIC5.41□□□□□ -1.54
RAE1P78406 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.41□□□□□ -1.54
RAE1P78406 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.41□□□□□ -1.54
RAE1P78406 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.41□□□□□ -1.54
RAE1P78406 AC073593.1-201ENST00000624500 411 ntBASIC5.41□□□□□ -1.54
RAE1P78406 AC019226.2-201ENST00000625973 424 ntBASIC5.41□□□□□ -1.54
RAE1P78406 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.41□□□□□ -1.54
RAE1P78406 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RAE1P78406 AC011503.2-201ENST00000594230 1500 ntBASIC5.41□□□□□ -1.54
RAE1P78406 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RAE1P78406 AC068870.1-201ENST00000563737 2455 ntBASIC5.41□□□□□ -1.54
RAE1P78406 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RAE1P78406 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RAE1P78406 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.41□□□□□ -1.54
RAE1P78406 GTF2IP4-201ENST00000453092 2054 ntBASIC5.41□□□□□ -1.54
RAE1P78406 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RAE1P78406 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
RAE1P78406 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.4□□□□□ -1.54
RAE1P78406 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
RAE1P78406 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
RAE1P78406 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.4□□□□□ -1.54
RAE1P78406 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.4□□□□□ -1.54
RAE1P78406 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.4□□□□□ -1.54
RAE1P78406 AC104964.3-201ENST00000606115 2860 ntBASIC5.4□□□□□ -1.54
RAE1P78406 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RAE1P78406 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RAE1P78406 RNU5B-1-201ENST00000363286 116 ntBASIC5.4□□□□□ -1.54
RAE1P78406 RNA5SP30-201ENST00000365552 115 ntBASIC5.4□□□□□ -1.54
RAE1P78406 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.4□□□□□ -1.54
RAE1P78406 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
RAE1P78406 GAPDHP15-201ENST00000398586 975 ntBASIC5.4□□□□□ -1.54
RAE1P78406 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.4□□□□□ -1.54
RAE1P78406 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.4□□□□□ -1.54
RAE1P78406 AC092648.1-201ENST00000425870 423 ntBASIC5.4□□□□□ -1.54
RAE1P78406 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.4□□□□□ -1.54
RAE1P78406 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.4□□□□□ -1.54
RAE1P78406 AC138761.5-201ENST00000433967 325 ntBASIC5.4□□□□□ -1.54
RAE1P78406 AC093716.1-201ENST00000435923 377 ntBASIC5.4□□□□□ -1.54
RAE1P78406 OR10R1P-201ENST00000441524 1141 ntBASIC5.4□□□□□ -1.54
RAE1P78406 Z77249.1-201ENST00000444622 1175 ntBASIC5.4□□□□□ -1.54
RAE1P78406 AL591719.1-201ENST00000444669 744 ntBASIC5.4□□□□□ -1.54
RAE1P78406 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 SNORD125-201ENST00000459538 96 ntBASIC5.4□□□□□ -1.54
RAE1P78406 RPS20P4-201ENST00000461659 355 ntBASIC5.4□□□□□ -1.54
RAE1P78406 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.4□□□□□ -1.54
RAE1P78406 GLUD1P3-202ENST00000508551 200 ntBASIC5.4□□□□□ -1.54
RAE1P78406 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.4□□□□□ -1.54
RAE1P78406 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.4□□□□□ -1.54
RAE1P78406 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.4□□□□□ -1.54
RAE1P78406 TRIM77BP-201ENST00000524985 1119 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms