Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNA5SP438-201ENST00000516561 112 ntBASIC5.2□□□□□ -1.58
CDH12P55289 AC010476.1-201ENST00000519111 851 ntBASIC5.2□□□□□ -1.58
CDH12P55289 PMS2P3-207ENST00000529061 717 ntBASIC5.2□□□□□ -1.58
CDH12P55289 HMGN2P36-201ENST00000529541 409 ntBASIC5.2□□□□□ -1.58
CDH12P55289 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH12P55289 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH12P55289 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH12P55289 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.2□□□□□ -1.58
CDH12P55289 LINC00556-201ENST00000569603 412 ntBASIC5.2□□□□□ -1.58
CDH12P55289 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH12P55289 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH12P55289 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDH12P55289 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDH12P55289 CBX3P2-202ENST00000583365 535 ntBASIC5.2□□□□□ -1.58
CDH12P55289 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.2□□□□□ -1.58
CDH12P55289 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH12P55289 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH12P55289 AC112220.2-201ENST00000605513 533 ntBASIC5.2□□□□□ -1.58
CDH12P55289 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH12P55289 AC124016.2-201ENST00000610058 665 ntBASIC5.2□□□□□ -1.58
CDH12P55289 DUXAP10-204ENST00000612052 616 ntBASIC5.2□□□□□ -1.58
CDH12P55289 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH12P55289 AC090607.5-201ENST00000615692 224 ntBASIC5.2□□□□□ -1.58
CDH12P55289 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH12P55289 AC093875.1-201ENST00000623688 504 ntBASIC5.2□□□□□ -1.58
CDH12P55289 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDH12P55289 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDH12P55289 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CDH12P55289 AC112198.2-201ENST00000426589 6996 ntBASIC5.2□□□□□ -1.58
CDH12P55289 AC006206.1-201ENST00000544842 3387 ntBASIC5.2□□□□□ -1.58
CDH12P55289 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CDH12P55289 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CDH12P55289 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH12P55289 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH12P55289 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH12P55289 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDH12P55289 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH12P55289 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH12P55289 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH12P55289 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
CDH12P55289 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH12P55289 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH12P55289 AC132825.1-201ENST00000463573 2247 ntBASIC5.19□□□□□ -1.58
CDH12P55289 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH12P55289 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH12P55289 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH12P55289 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH12P55289 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH12P55289 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH12P55289 AL159987.1-201ENST00000347911 293 ntBASIC5.19□□□□□ -1.58
CDH12P55289 RNA5SP477-201ENST00000362639 119 ntBASIC5.19□□□□□ -1.58
CDH12P55289 RNU6-481P-201ENST00000384194 107 ntBASIC5.19□□□□□ -1.58
CDH12P55289 RNU6-31P-201ENST00000384388 108 ntBASIC5.19□□□□□ -1.58
CDH12P55289 RMRPP5-201ENST00000411156 267 ntBASIC5.19□□□□□ -1.58
CDH12P55289 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH12P55289 TATDN1P1-201ENST00000414123 891 ntBASIC5.19□□□□□ -1.58
CDH12P55289 BTF3P9-201ENST00000418784 283 ntBASIC5.19□□□□□ -1.58
CDH12P55289 NENFP1-201ENST00000419476 466 ntBASIC5.19□□□□□ -1.58
CDH12P55289 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH12P55289 AL160175.1-201ENST00000428124 247 ntBASIC5.19□□□□□ -1.58
CDH12P55289 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH12P55289 NANOGP9-201ENST00000439890 892 ntBASIC5.19□□□□□ -1.58
CDH12P55289 AL353898.1-201ENST00000444055 238 ntBASIC5.19□□□□□ -1.58
CDH12P55289 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH12P55289 RPL32P33-201ENST00000487023 394 ntBASIC5.19□□□□□ -1.58
CDH12P55289 AC073610.1-201ENST00000489971 396 ntBASIC5.19□□□□□ -1.58
CDH12P55289 HMGB1P38-201ENST00000490557 577 ntBASIC5.19□□□□□ -1.58
CDH12P55289 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH12P55289 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH12P55289 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH12P55289 SEPT10P1-201ENST00000517342 1162 ntBASIC5.19□□□□□ -1.58
CDH12P55289 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH12P55289 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH12P55289 AC021451.1-201ENST00000523498 1129 ntBASIC5.19□□□□□ -1.58
CDH12P55289 AC027369.2-201ENST00000528030 440 ntBASIC5.19□□□□□ -1.58
CDH12P55289 AP001804.2-201ENST00000533932 910 ntBASIC5.19□□□□□ -1.58
CDH12P55289 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH12P55289 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH12P55289 AC104229.1-201ENST00000561364 255 ntBASIC5.19□□□□□ -1.58
CDH12P55289 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH12P55289 AL512427.1-201ENST00000618593 349 ntBASIC5.19□□□□□ -1.58
CDH12P55289 AC241377.1-201ENST00000619797 406 ntBASIC5.19□□□□□ -1.58
CDH12P55289 AC073592.6-201ENST00000624271 415 ntBASIC5.19□□□□□ -1.58
CDH12P55289 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CDH12P55289 AC097655.1-201ENST00000635075 318 ntBASIC5.19□□□□□ -1.58
CDH12P55289 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH12P55289 PWAR1-201ENST00000624188 2414 ntBASIC5.19□□□□□ -1.58
CDH12P55289 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH12P55289 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH12P55289 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH12P55289 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CDH12P55289 AC012078.1-201ENST00000405035 1646 ntBASIC5.19□□□□□ -1.58
CDH12P55289 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH12P55289 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH12P55289 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH12P55289 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CDH12P55289 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH12P55289 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH12P55289 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH12P55289 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms