Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MIR6780A-201ENST00000615089 68 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGCS2P54868 AC073869.10-201ENST00000642016 354 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS2P54868 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HMGCS2P54868 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGCS2P54868 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGCS2P54868 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGCS2P54868 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS2P54868 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS2P54868 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
HMGCS2P54868 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HMGCS2P54868 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
HMGCS2P54868 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.9□□□□□ -1.46
HMGCS2P54868 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
HMGCS2P54868 AC079741.1-201ENST00000321498 212 ntBASIC5.9□□□□□ -1.46
HMGCS2P54868 RN7SKP113-201ENST00000363891 295 ntBASIC5.9□□□□□ -1.46
HMGCS2P54868 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
HMGCS2P54868 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HMGCS2P54868 AC004074.1-201ENST00000421810 1063 ntBASIC5.9□□□□□ -1.46
HMGCS2P54868 AC017019.1-201ENST00000426129 261 ntBASIC5.9□□□□□ -1.46
HMGCS2P54868 EIF2S2P3-201ENST00000428356 999 ntBASIC5.9□□□□□ -1.46
HMGCS2P54868 AL359265.1-201ENST00000440296 795 ntBASIC5.9□□□□□ -1.46
HMGCS2P54868 AL354714.3-201ENST00000447284 493 ntBASIC5.9□□□□□ -1.46
HMGCS2P54868 TCEA1P1-201ENST00000449716 880 ntBASIC5.9□□□□□ -1.46
HMGCS2P54868 AL513533.1-201ENST00000453728 415 ntBASIC5.9□□□□□ -1.46
HMGCS2P54868 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.9□□□□□ -1.46
HMGCS2P54868 ABCC13-202ENST00000463099 3842 ntBASIC5.9□□□□□ -1.46
HMGCS2P54868 RN7SL354P-201ENST00000469282 294 ntBASIC5.9□□□□□ -1.46
HMGCS2P54868 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.9□□□□□ -1.46
HMGCS2P54868 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.9□□□□□ -1.46
HMGCS2P54868 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGCS2P54868 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGCS2P54868 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGCS2P54868 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGCS2P54868 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGCS2P54868 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.9□□□□□ -1.46
HMGCS2P54868 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGCS2P54868 AC009962.1-201ENST00000567327 3813 ntBASIC5.9□□□□□ -1.46
HMGCS2P54868 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.9□□□□□ -1.46
HMGCS2P54868 BNIP3P35-201ENST00000604530 490 ntBASIC5.9□□□□□ -1.46
HMGCS2P54868 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.9□□□□□ -1.46
HMGCS2P54868 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.9□□□□□ -1.46
HMGCS2P54868 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.9□□□□□ -1.46
HMGCS2P54868 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
HMGCS2P54868 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HMGCS2P54868 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.9□□□□□ -1.47
HMGCS2P54868 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HMGCS2P54868 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HMGCS2P54868 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HMGCS2P54868 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HMGCS2P54868 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HMGCS2P54868 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HMGCS2P54868 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.9□□□□□ -1.47
HMGCS2P54868 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HMGCS2P54868 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HMGCS2P54868 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGCS2P54868 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HMGCS2P54868 SAMMSON-226ENST00000642089 1582 ntBASIC5.89□□□□□ -1.47
HMGCS2P54868 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
HMGCS2P54868 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGCS2P54868 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
HMGCS2P54868 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.89□□□□□ -1.47
HMGCS2P54868 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGCS2P54868 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.89□□□□□ -1.47
HMGCS2P54868 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGCS2P54868 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HMGCS2P54868 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HMGCS2P54868 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HMGCS2P54868 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HMGCS2P54868 RNA5SP113-201ENST00000410486 84 ntBASIC5.89□□□□□ -1.47
HMGCS2P54868 RPS21P8-201ENST00000413365 247 ntBASIC5.89□□□□□ -1.47
HMGCS2P54868 AC119751.6-201ENST00000416712 186 ntBASIC5.89□□□□□ -1.47
HMGCS2P54868 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGCS2P54868 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGCS2P54868 FTH1P2-201ENST00000466086 412 ntBASIC5.89□□□□□ -1.47
HMGCS2P54868 AC093267.1-201ENST00000489176 961 ntBASIC5.89□□□□□ -1.47
HMGCS2P54868 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGCS2P54868 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.89□□□□□ -1.47
HMGCS2P54868 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.89□□□□□ -1.47
HMGCS2P54868 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.89□□□□□ -1.47
HMGCS2P54868 MORF4L1P3-201ENST00000525966 950 ntBASIC5.89□□□□□ -1.47
HMGCS2P54868 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HMGCS2P54868 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGCS2P54868 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGCS2P54868 AC018558.5-201ENST00000565840 952 ntBASIC5.89□□□□□ -1.47
HMGCS2P54868 AP001357.1-201ENST00000586304 1053 ntBASIC5.89□□□□□ -1.47
HMGCS2P54868 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HMGCS2P54868 AL023583.1-201ENST00000607518 1143 ntBASIC5.89□□□□□ -1.47
HMGCS2P54868 AC018690.1-201ENST00000608144 626 ntBASIC5.89□□□□□ -1.47
HMGCS2P54868 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGCS2P54868 AC063952.1-203ENST00000634410 658 ntBASIC5.89□□□□□ -1.47
HMGCS2P54868 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HMGCS2P54868 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGCS2P54868 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGCS2P54868 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HMGCS2P54868 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGCS2P54868 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGCS2P54868 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGCS2P54868 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms