Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CLTCL1P53675 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CLTCL1P53675 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.13□□□□□ -1.27
CLTCL1P53675 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.13□□□□□ -1.27
CLTCL1P53675 DHX40P1-201ENST00000588725 1412 ntBASIC7.13□□□□□ -1.27
CLTCL1P53675 FHIT-201ENST00000341848 174 ntTSL 3 BASIC7.13□□□□□ -1.27
CLTCL1P53675 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC7.13□□□□□ -1.27
CLTCL1P53675 SNORA48.4-201ENST00000391089 134 ntBASIC7.13□□□□□ -1.27
CLTCL1P53675 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC7.13□□□□□ -1.27
CLTCL1P53675 NRBF2P3-201ENST00000432731 865 ntBASIC7.13□□□□□ -1.27
CLTCL1P53675 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC7.13□□□□□ -1.27
CLTCL1P53675 AC093720.1-201ENST00000505681 714 ntBASIC7.13□□□□□ -1.27
CLTCL1P53675 AP001521.2-201ENST00000608772 546 ntBASIC7.13□□□□□ -1.27
CLTCL1P53675 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CLTCL1P53675 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC7.13□□□□□ -1.27
CLTCL1P53675 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CLTCL1P53675 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CLTCL1P53675 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.13□□□□□ -1.27
CLTCL1P53675 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CLTCL1P53675 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CLTCL1P53675 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CLTCL1P53675 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.13□□□□□ -1.27
CLTCL1P53675 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.13□□□□□ -1.27
CLTCL1P53675 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CLTCL1P53675 SNORA70F-201ENST00000384142 135 ntBASIC7.12□□□□□ -1.27
CLTCL1P53675 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.12□□□□□ -1.27
CLTCL1P53675 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC7.12□□□□□ -1.27
CLTCL1P53675 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC7.12□□□□□ -1.27
CLTCL1P53675 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC7.12□□□□□ -1.27
CLTCL1P53675 RN7SKP276-201ENST00000516242 268 ntBASIC7.12□□□□□ -1.27
CLTCL1P53675 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC7.12□□□□□ -1.27
CLTCL1P53675 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC7.12□□□□□ -1.27
CLTCL1P53675 PRPF19P1-201ENST00000584766 898 ntBASIC7.12□□□□□ -1.27
CLTCL1P53675 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC7.12□□□□□ -1.27
CLTCL1P53675 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CLTCL1P53675 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CLTCL1P53675 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CLTCL1P53675 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
CLTCL1P53675 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC7.12□□□□□ -1.27
CLTCL1P53675 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CLTCL1P53675 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.12□□□□□ -1.27
CLTCL1P53675 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
CLTCL1P53675 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CLTCL1P53675 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC7.12□□□□□ -1.27
CLTCL1P53675 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CLTCL1P53675 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CLTCL1P53675 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CLTCL1P53675 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CLTCL1P53675 RPL12P43-201ENST00000420608 499 ntBASIC7.12□□□□□ -1.27
CLTCL1P53675 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC7.12□□□□□ -1.27
CLTCL1P53675 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC7.12□□□□□ -1.27
CLTCL1P53675 AC091180.1-201ENST00000462104 372 ntBASIC7.12□□□□□ -1.27
CLTCL1P53675 OR52A4P-201ENST00000472867 958 ntBASIC7.12□□□□□ -1.27
CLTCL1P53675 AC128716.1-201ENST00000475129 166 ntBASIC7.12□□□□□ -1.27
CLTCL1P53675 RN7SL244P-201ENST00000493405 297 ntBASIC7.12□□□□□ -1.27
CLTCL1P53675 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.12□□□□□ -1.27
CLTCL1P53675 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.12□□□□□ -1.27
CLTCL1P53675 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC7.12□□□□□ -1.27
CLTCL1P53675 AL049839.1-201ENST00000556151 657 ntBASIC7.12□□□□□ -1.27
CLTCL1P53675 AC116553.2-201ENST00000564203 463 ntBASIC7.12□□□□□ -1.27
CLTCL1P53675 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CLTCL1P53675 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CLTCL1P53675 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC7.12□□□□□ -1.27
CLTCL1P53675 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC7.12□□□□□ -1.27
CLTCL1P53675 OFD1P9Y-201ENST00000417699 1491 ntBASIC7.11□□□□□ -1.27
CLTCL1P53675 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLTCL1P53675 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CLTCL1P53675 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CLTCL1P53675 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.11□□□□□ -1.27
CLTCL1P53675 AC010168.2-201ENST00000562691 5428 ntBASIC7.11□□□□□ -1.27
CLTCL1P53675 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
CLTCL1P53675 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLTCL1P53675 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC7.11□□□□□ -1.27
CLTCL1P53675 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLTCL1P53675 OR1L6-202ENST00000373684 1044 ntBASIC7.11□□□□□ -1.27
CLTCL1P53675 RPL12P9-201ENST00000412942 488 ntBASIC7.11□□□□□ -1.27
CLTCL1P53675 C4BPAP2-201ENST00000428434 478 ntBASIC7.11□□□□□ -1.27
CLTCL1P53675 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC7.11□□□□□ -1.27
CLTCL1P53675 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC7.11□□□□□ -1.27
CLTCL1P53675 AL023583.1-201ENST00000607518 1143 ntBASIC7.11□□□□□ -1.27
CLTCL1P53675 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.11□□□□□ -1.27
CLTCL1P53675 NCLP2-201ENST00000416078 1462 ntBASIC7.11□□□□□ -1.27
CLTCL1P53675 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLTCL1P53675 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLTCL1P53675 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
CLTCL1P53675 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CLTCL1P53675 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.1□□□□□ -1.27
CLTCL1P53675 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.1□□□□□ -1.27
CLTCL1P53675 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CLTCL1P53675 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.1□□□□□ -1.27
CLTCL1P53675 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CLTCL1P53675 Z98755.1-201ENST00000407015 1384 ntBASIC7.1□□□□□ -1.27
CLTCL1P53675 SNORA73.1-201ENST00000363107 205 ntBASIC7.1□□□□□ -1.27
CLTCL1P53675 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CLTCL1P53675 RN7SKP106-201ENST00000410832 272 ntBASIC7.1□□□□□ -1.27
CLTCL1P53675 GPS2P1-201ENST00000411761 986 ntBASIC7.1□□□□□ -1.27
CLTCL1P53675 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC7.1□□□□□ -1.27
CLTCL1P53675 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.1□□□□□ -1.27
CLTCL1P53675 AL450023.3-201ENST00000440592 271 ntBASIC7.1□□□□□ -1.27
CLTCL1P53675 OR1H1P-201ENST00000448731 937 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms