Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AL121839.1-201ENST00000556233 1185 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCNKAP51800 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 AC010487.1-201ENST00000594408 1172 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 IMMP1LP3-201ENST00000604197 224 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 AL355802.4-201ENST00000607635 548 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 Z95327.3-201ENST00000610385 572 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 MIR6826-201ENST00000617808 98 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 MIR6837-201ENST00000620884 64 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 AP006248.3-201ENST00000623580 594 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 AC097372.4-201ENST00000625025 466 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCNKAP51800 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CLCNKAP51800 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.41□□□□□ -1.54
CLCNKAP51800 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLCNKAP51800 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLCNKAP51800 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLCNKAP51800 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.4□□□□□ -1.54
CLCNKAP51800 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CLCNKAP51800 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.4□□□□□ -1.54
CLCNKAP51800 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCNKAP51800 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.4□□□□□ -1.54
CLCNKAP51800 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLCNKAP51800 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CLCNKAP51800 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLCNKAP51800 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCNKAP51800 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CLCNKAP51800 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLCNKAP51800 AL672167.2-201ENST00000377164 879 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.4□□□□□ -1.54
CLCNKAP51800 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.4□□□□□ -1.54
CLCNKAP51800 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.4□□□□□ -1.54
CLCNKAP51800 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.4□□□□□ -1.54
CLCNKAP51800 RAB9AP4-201ENST00000415230 609 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 MARK2P12-201ENST00000420129 585 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 AC073464.3-201ENST00000422564 712 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 HSFY1P1-201ENST00000423928 1178 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 AC023141.6-201ENST00000429418 337 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 HSFY7P-201ENST00000432672 318 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.4□□□□□ -1.54
CLCNKAP51800 CFL1P1-202ENST00000432948 411 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.4□□□□□ -1.54
CLCNKAP51800 HSFY8P-201ENST00000437934 318 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 AC105399.1-202ENST00000447303 205 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 HSFY5P-201ENST00000453726 309 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 EIF2S2P4-201ENST00000461070 984 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLCNKAP51800 CAB39P1-201ENST00000502277 460 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.4□□□□□ -1.54
CLCNKAP51800 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.4□□□□□ -1.54
CLCNKAP51800 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.4□□□□□ -1.54
CLCNKAP51800 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.4□□□□□ -1.54
CLCNKAP51800 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLCNKAP51800 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.4□□□□□ -1.54
CLCNKAP51800 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLCNKAP51800 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.4□□□□□ -1.54
CLCNKAP51800 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCNKAP51800 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCNKAP51800 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCNKAP51800 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCNKAP51800 AL391001.1-201ENST00000602747 715 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 SUMO2P15-201ENST00000604285 278 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 OR51C1P-201ENST00000608504 942 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 AC000068.2-201ENST00000608816 460 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 AL512624.1-201ENST00000613638 469 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCNKAP51800 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCNKAP51800 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.4□□□□□ -1.54
CLCNKAP51800 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLCNKAP51800 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLCNKAP51800 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLCNKAP51800 CASC19-264ENST00000641912 1184 ntBASIC5.4□□□□□ -1.54
CLCNKAP51800 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLCNKAP51800 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.4□□□□□ -1.55
CLCNKAP51800 AC006484.1-201ENST00000435086 1884 ntBASIC5.4□□□□□ -1.55
CLCNKAP51800 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CLCNKAP51800 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLCNKAP51800 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
CLCNKAP51800 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.4□□□□□ -1.55
CLCNKAP51800 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLCNKAP51800 AL353796.1-201ENST00000561542 3241 ntBASIC5.4□□□□□ -1.55
CLCNKAP51800 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
CLCNKAP51800 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLCNKAP51800 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.4□□□□□ -1.55
CLCNKAP51800 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms