Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC010476.1-201ENST00000519111 851 ntBASIC5.32□□□□□ -1.56
BRCA2P51587 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.32□□□□□ -1.56
BRCA2P51587 VN1R92P-201ENST00000598511 928 ntBASIC5.32□□□□□ -1.56
BRCA2P51587 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 AC005261.4-201ENST00000600047 1385 ntBASIC5.32□□□□□ -1.56
BRCA2P51587 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.32□□□□□ -1.56
BRCA2P51587 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC5.32□□□□□ -1.56
BRCA2P51587 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 OR8B9P-202ENST00000642028 5216 ntBASIC5.32□□□□□ -1.56
BRCA2P51587 RNA5SP366-201ENST00000365454 123 ntBASIC5.32□□□□□ -1.56
BRCA2P51587 H3F3BP1-201ENST00000440551 403 ntBASIC5.32□□□□□ -1.56
BRCA2P51587 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.32□□□□□ -1.56
BRCA2P51587 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.32□□□□□ -1.56
BRCA2P51587 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.32□□□□□ -1.56
BRCA2P51587 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.32□□□□□ -1.56
BRCA2P51587 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.32□□□□□ -1.56
BRCA2P51587 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.32□□□□□ -1.56
BRCA2P51587 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BRCA2P51587 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRCA2P51587 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
BRCA2P51587 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRCA2P51587 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRCA2P51587 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
BRCA2P51587 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRCA2P51587 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.31□□□□□ -1.56
BRCA2P51587 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRCA2P51587 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.31□□□□□ -1.56
BRCA2P51587 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.31□□□□□ -1.56
BRCA2P51587 AC023043.4-201ENST00000612081 449 ntBASIC5.31□□□□□ -1.56
BRCA2P51587 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
BRCA2P51587 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRCA2P51587 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
BRCA2P51587 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.31□□□□□ -1.56
BRCA2P51587 RNA5SP372-201ENST00000390836 115 ntBASIC5.31□□□□□ -1.56
BRCA2P51587 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.31□□□□□ -1.56
BRCA2P51587 HSFY1P1-201ENST00000423928 1178 ntBASIC5.31□□□□□ -1.56
BRCA2P51587 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.31□□□□□ -1.56
BRCA2P51587 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.31□□□□□ -1.56
BRCA2P51587 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.31□□□□□ -1.56
BRCA2P51587 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.31□□□□□ -1.56
BRCA2P51587 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.31□□□□□ -1.56
BRCA2P51587 CDRT1-208ENST00000630868 794 ntBASIC5.31□□□□□ -1.56
BRCA2P51587 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
BRCA2P51587 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRCA2P51587 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.31□□□□□ -1.56
BRCA2P51587 AC063976.2-201ENST00000425667 3556 ntBASIC5.31□□□□□ -1.56
BRCA2P51587 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.3□□□□□ -1.56
BRCA2P51587 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BRCA2P51587 CRYBB2P1-203ENST00000415709 538 ntBASIC5.3□□□□□ -1.56
BRCA2P51587 RRM2P4-201ENST00000441721 562 ntBASIC5.3□□□□□ -1.56
BRCA2P51587 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.3□□□□□ -1.56
BRCA2P51587 RN7SL98P-201ENST00000462271 300 ntBASIC5.3□□□□□ -1.56
BRCA2P51587 TPT1P3-201ENST00000492841 512 ntBASIC5.3□□□□□ -1.56
BRCA2P51587 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.3□□□□□ -1.56
BRCA2P51587 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
BRCA2P51587 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BRCA2P51587 AC090017.1-201ENST00000548612 1779 ntBASIC5.3□□□□□ -1.56
BRCA2P51587 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BRCA2P51587 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BRCA2P51587 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
BRCA2P51587 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
BRCA2P51587 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.3□□□□□ -1.56
BRCA2P51587 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
BRCA2P51587 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.3□□□□□ -1.56
BRCA2P51587 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.3□□□□□ -1.56
BRCA2P51587 AL356387.2-201ENST00000422272 243 ntBASIC5.3□□□□□ -1.56
BRCA2P51587 RPL7AP61-201ENST00000443410 636 ntBASIC5.3□□□□□ -1.56
BRCA2P51587 AC005412.2-201ENST00000492004 341 ntBASIC5.3□□□□□ -1.56
BRCA2P51587 TRAV8-5-201ENST00000537369 341 ntBASIC5.3□□□□□ -1.56
BRCA2P51587 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC5.3□□□□□ -1.56
BRCA2P51587 AL121890.2-201ENST00000617644 465 ntBASIC5.3□□□□□ -1.56
BRCA2P51587 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.3□□□□□ -1.56
BRCA2P51587 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
BRCA2P51587 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BRCA2P51587 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRCA2P51587 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.3□□□□□ -1.56
BRCA2P51587 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRCA2P51587 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRCA2P51587 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
BRCA2P51587 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
BRCA2P51587 SNORA62.3-201ENST00000365110 153 ntBASIC5.3□□□□□ -1.56
BRCA2P51587 RNA5SP283-201ENST00000365604 119 ntBASIC5.3□□□□□ -1.56
BRCA2P51587 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.3□□□□□ -1.56
BRCA2P51587 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.3□□□□□ -1.56
BRCA2P51587 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BRCA2P51587 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
BRCA2P51587 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRCA2P51587 ERG-210ENST00000442448 5034 ntTSL 5 BASIC5.3□□□□□ -1.56
BRCA2P51587 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
BRCA2P51587 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRCA2P51587 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BRCA2P51587 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
BRCA2P51587 RNU1-94P-201ENST00000362627 173 ntBASIC5.29□□□□□ -1.56
BRCA2P51587 AL590762.2-201ENST00000395798 571 ntBASIC5.29□□□□□ -1.56
BRCA2P51587 AL356095.1-201ENST00000417217 199 ntBASIC5.29□□□□□ -1.56
BRCA2P51587 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.29□□□□□ -1.56
BRCA2P51587 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.29□□□□□ -1.56
BRCA2P51587 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms