Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC006363.1-201ENST00000603806 463 ntBASIC6.78□□□□□ -1.32
MRE11P49959 AC141002.1-201ENST00000607025 279 ntBASIC6.78□□□□□ -1.32
MRE11P49959 AC037198.3-201ENST00000616754 526 ntBASIC6.78□□□□□ -1.32
MRE11P49959 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
MRE11P49959 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.78□□□□□ -1.32
MRE11P49959 CASC19-222ENST00000641321 1173 ntBASIC6.78□□□□□ -1.32
MRE11P49959 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.78□□□□□ -1.32
MRE11P49959 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
MRE11P49959 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.78□□□□□ -1.32
MRE11P49959 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.78□□□□□ -1.32
MRE11P49959 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.78□□□□□ -1.32
MRE11P49959 AL445523.1-201ENST00000451184 1362 ntBASIC6.78□□□□□ -1.32
MRE11P49959 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.78□□□□□ -1.32
MRE11P49959 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
MRE11P49959 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.78□□□□□ -1.32
MRE11P49959 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.32
MRE11P49959 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MRE11P49959 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MRE11P49959 HSPD1P14-201ENST00000432666 1618 ntBASIC6.77□□□□□ -1.33
MRE11P49959 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
MRE11P49959 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MRE11P49959 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MRE11P49959 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MRE11P49959 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MRE11P49959 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.77□□□□□ -1.33
MRE11P49959 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.77□□□□□ -1.33
MRE11P49959 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.77□□□□□ -1.33
MRE11P49959 XKRY2-201ENST00000442362 1093 ntBASIC6.77□□□□□ -1.33
MRE11P49959 AL591719.1-201ENST00000444669 744 ntBASIC6.77□□□□□ -1.33
MRE11P49959 AL445669.2-201ENST00000454425 421 ntBASIC6.77□□□□□ -1.33
MRE11P49959 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.77□□□□□ -1.33
MRE11P49959 RN7SL826P-201ENST00000479724 288 ntBASIC6.77□□□□□ -1.33
MRE11P49959 RN7SL817P-201ENST00000480777 288 ntBASIC6.77□□□□□ -1.33
MRE11P49959 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.77□□□□□ -1.33
MRE11P49959 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC6.77□□□□□ -1.33
MRE11P49959 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MRE11P49959 MTCO3P28-201ENST00000513351 515 ntBASIC6.77□□□□□ -1.33
MRE11P49959 SEPT10P1-201ENST00000517342 1162 ntBASIC6.77□□□□□ -1.33
MRE11P49959 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
MRE11P49959 IGHV4-55-201ENST00000520889 368 ntBASIC6.77□□□□□ -1.33
MRE11P49959 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.77□□□□□ -1.33
MRE11P49959 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.77□□□□□ -1.33
MRE11P49959 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.77□□□□□ -1.33
MRE11P49959 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.77□□□□□ -1.33
MRE11P49959 AC026956.1-201ENST00000558741 396 ntBASIC6.77□□□□□ -1.33
MRE11P49959 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.77□□□□□ -1.33
MRE11P49959 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.77□□□□□ -1.33
MRE11P49959 AC090666.1-201ENST00000578241 445 ntBASIC6.77□□□□□ -1.33
MRE11P49959 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.77□□□□□ -1.33
MRE11P49959 AC024940.4-201ENST00000605507 246 ntBASIC6.77□□□□□ -1.33
MRE11P49959 AC092266.1-201ENST00000610958 165 ntBASIC6.77□□□□□ -1.33
MRE11P49959 CYCSP41-201ENST00000616920 296 ntBASIC6.77□□□□□ -1.33
MRE11P49959 AC241377.1-201ENST00000619797 406 ntBASIC6.77□□□□□ -1.33
MRE11P49959 AP003499.2-201ENST00000624100 483 ntBASIC6.77□□□□□ -1.33
MRE11P49959 AC139792.2-201ENST00000624218 587 ntBASIC6.77□□□□□ -1.33
MRE11P49959 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.77□□□□□ -1.33
MRE11P49959 AC132825.7-201ENST00000638744 335 ntBASIC6.77□□□□□ -1.33
MRE11P49959 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.77□□□□□ -1.33
MRE11P49959 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MRE11P49959 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.77□□□□□ -1.33
MRE11P49959 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MRE11P49959 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.77□□□□□ -1.33
MRE11P49959 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.76□□□□□ -1.33
MRE11P49959 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
MRE11P49959 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
MRE11P49959 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.76□□□□□ -1.33
MRE11P49959 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.76□□□□□ -1.33
MRE11P49959 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MRE11P49959 AC003045.1-201ENST00000398779 713 ntBASIC6.76□□□□□ -1.33
MRE11P49959 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.76□□□□□ -1.33
MRE11P49959 AL133482.1-201ENST00000415988 498 ntBASIC6.76□□□□□ -1.33
MRE11P49959 SETP9-201ENST00000423837 832 ntBASIC6.76□□□□□ -1.33
MRE11P49959 MTND4LP13-201ENST00000425022 298 ntBASIC6.76□□□□□ -1.33
MRE11P49959 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.76□□□□□ -1.33
MRE11P49959 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
MRE11P49959 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.76□□□□□ -1.33
MRE11P49959 AL450996.1-201ENST00000445574 1202 ntBASIC6.76□□□□□ -1.33
MRE11P49959 OR52Y1P-201ENST00000452418 828 ntBASIC6.76□□□□□ -1.33
MRE11P49959 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC6.76□□□□□ -1.33
MRE11P49959 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.76□□□□□ -1.33
MRE11P49959 AC023194.2-201ENST00000465398 406 ntBASIC6.76□□□□□ -1.33
MRE11P49959 AC093663.2-201ENST00000484625 313 ntBASIC6.76□□□□□ -1.33
MRE11P49959 AC093267.1-201ENST00000489176 961 ntBASIC6.76□□□□□ -1.33
MRE11P49959 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.76□□□□□ -1.33
MRE11P49959 SNX18P24-201ENST00000505249 671 ntBASIC6.76□□□□□ -1.33
MRE11P49959 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.76□□□□□ -1.33
MRE11P49959 AC117522.2-201ENST00000510049 657 ntBASIC6.76□□□□□ -1.33
MRE11P49959 RNA5SP362-201ENST00000516048 118 ntBASIC6.76□□□□□ -1.33
MRE11P49959 CYCSP25-201ENST00000525280 316 ntBASIC6.76□□□□□ -1.33
MRE11P49959 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.76□□□□□ -1.33
MRE11P49959 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.76□□□□□ -1.33
MRE11P49959 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC6.76□□□□□ -1.33
MRE11P49959 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC6.76□□□□□ -1.33
MRE11P49959 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.76□□□□□ -1.33
MRE11P49959 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.76□□□□□ -1.33
MRE11P49959 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
MRE11P49959 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
MRE11P49959 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.76□□□□□ -1.33
MRE11P49959 AC004805.3-201ENST00000603178 310 ntBASIC6.76□□□□□ -1.33
MRE11P49959 AC112503.1-201ENST00000608436 391 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms