Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 AC099654.15-201ENST00000639802 509 ntBASIC6.9□□□□□ -1.3
LIG3P49916 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LIG3P49916 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.9□□□□□ -1.31
LIG3P49916 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.9□□□□□ -1.31
LIG3P49916 AC006213.6-201ENST00000623722 4179 ntBASIC6.9□□□□□ -1.31
LIG3P49916 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
LIG3P49916 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
LIG3P49916 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.9□□□□□ -1.31
LIG3P49916 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
LIG3P49916 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
LIG3P49916 AL512329.1-201ENST00000404600 1592 ntBASIC6.9□□□□□ -1.31
LIG3P49916 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
LIG3P49916 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
LIG3P49916 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
LIG3P49916 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
LIG3P49916 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
LIG3P49916 AC004023.1-201ENST00000561473 1744 ntBASIC6.9□□□□□ -1.31
LIG3P49916 AC005332.9-201ENST00000620266 2921 ntBASIC6.9□□□□□ -1.31
LIG3P49916 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
LIG3P49916 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.89□□□□□ -1.31
LIG3P49916 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
LIG3P49916 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG3P49916 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
LIG3P49916 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LIG3P49916 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LIG3P49916 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LIG3P49916 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG3P49916 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LIG3P49916 RNU6-1339P-201ENST00000363574 91 ntBASIC6.89□□□□□ -1.31
LIG3P49916 RN7SKP130-201ENST00000364924 301 ntBASIC6.89□□□□□ -1.31
LIG3P49916 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LIG3P49916 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
LIG3P49916 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.89□□□□□ -1.31
LIG3P49916 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LIG3P49916 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
LIG3P49916 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
LIG3P49916 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LIG3P49916 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LIG3P49916 RNU6-575P-201ENST00000411326 105 ntBASIC6.89□□□□□ -1.31
LIG3P49916 TPT1P2-201ENST00000413105 503 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.89□□□□□ -1.31
LIG3P49916 DPRXP1-201ENST00000426312 460 ntBASIC6.89□□□□□ -1.31
LIG3P49916 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
LIG3P49916 HMGB1P45-201ENST00000435986 653 ntBASIC6.89□□□□□ -1.31
LIG3P49916 BX679664.2-201ENST00000439282 283 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG3P49916 AC083855.1-201ENST00000440041 258 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG3P49916 AL020997.1-201ENST00000446554 349 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LIG3P49916 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG3P49916 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LIG3P49916 AC021205.1-201ENST00000468797 348 ntBASIC6.89□□□□□ -1.31
LIG3P49916 GAPDHP39-201ENST00000481866 979 ntBASIC6.89□□□□□ -1.31
LIG3P49916 RPL23AP80-201ENST00000495605 424 ntBASIC6.89□□□□□ -1.31
LIG3P49916 RPS26P24-201ENST00000497656 331 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG3P49916 AC113430.1-201ENST00000506872 718 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AC109458.1-201ENST00000508858 316 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AC079140.3-201ENST00000511111 550 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG3P49916 RNA5SP278-201ENST00000517055 102 ntBASIC6.89□□□□□ -1.31
LIG3P49916 EEF1B2P2-201ENST00000519625 676 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AC087752.2-201ENST00000521219 281 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG3P49916 AC109635.6-201ENST00000525487 1113 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AC005832.3-201ENST00000537929 631 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG3P49916 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
LIG3P49916 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG3P49916 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG3P49916 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG3P49916 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.89□□□□□ -1.31
LIG3P49916 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
LIG3P49916 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG3P49916 AC087683.1-201ENST00000591187 441 ntBASIC6.89□□□□□ -1.31
LIG3P49916 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG3P49916 AC020914.7-201ENST00000594477 545 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AC103881.1-201ENST00000603476 538 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AC111186.1-201ENST00000604684 130 ntBASIC6.89□□□□□ -1.31
LIG3P49916 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG3P49916 AL137000.1-201ENST00000610528 1244 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AL136981.2-201ENST00000617319 734 ntBASIC6.89□□□□□ -1.31
LIG3P49916 OR1N1-202ENST00000619659 939 ntBASIC6.89□□□□□ -1.31
LIG3P49916 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.89□□□□□ -1.31
LIG3P49916 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG3P49916 U6.107-201ENST00000637108 79 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AC068137.3-201ENST00000639191 341 ntBASIC6.89□□□□□ -1.31
LIG3P49916 AC073869.6-201ENST00000640656 341 ntBASIC6.89□□□□□ -1.31
LIG3P49916 GTF2H2B-203ENST00000508065 1432 ntBASIC6.89□□□□□ -1.31
LIG3P49916 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
LIG3P49916 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG3P49916 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.88□□□□□ -1.31
LIG3P49916 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.88□□□□□ -1.31
LIG3P49916 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.88□□□□□ -1.31
LIG3P49916 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LIG3P49916 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LIG3P49916 AC105749.1-201ENST00000631338 2008 ntBASIC6.88□□□□□ -1.31
LIG3P49916 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LIG3P49916 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms