Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CR1P49238 BLZF2P-201ENST00000553776 1130 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 AC127381.1-201ENST00000555979 939 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.63□□□□□ -1.67
CX3CR1P49238 RBM22P1-201ENST00000578589 1214 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 SNORD39.2-201ENST00000579995 76 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.63□□□□□ -1.67
CX3CR1P49238 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.63□□□□□ -1.67
CX3CR1P49238 AC009597.2-201ENST00000604659 592 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.63□□□□□ -1.67
CX3CR1P49238 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CR1P49238 BNIP3P41-202ENST00000616656 861 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CX3CR1P49238 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CX3CR1P49238 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.63□□□□□ -1.67
CX3CR1P49238 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CR1P49238 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CR1P49238 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CR1P49238 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CR1P49238 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CX3CR1P49238 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
CX3CR1P49238 TTC39DP-201ENST00000416781 1688 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CR1P49238 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CR1P49238 SMG1P7-201ENST00000565246 2704 ntBASIC4.63□□□□□ -1.67
CX3CR1P49238 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CR1P49238 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CR1P49238 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CR1P49238 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.63□□□□□ -1.67
CX3CR1P49238 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CR1P49238 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CR1P49238 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CR1P49238 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CX3CR1P49238 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CR1P49238 AL731566.1-201ENST00000620490 1937 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CR1P49238 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CR1P49238 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CR1P49238 AC107021.2-201ENST00000567714 2095 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CR1P49238 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CR1P49238 RNA5SP223-201ENST00000365174 120 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CR1P49238 MIR589-201ENST00000385238 99 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 EI24P3-201ENST00000399046 1062 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 OR4K12P-201ENST00000406538 961 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CR1P49238 RPS11P7-201ENST00000442125 465 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 CYCSP24-201ENST00000445119 316 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.62□□□□□ -1.67
CX3CR1P49238 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.62□□□□□ -1.67
CX3CR1P49238 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CX3CR1P49238 AC100832.1-201ENST00000471945 383 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 RN7SL814P-201ENST00000487715 300 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CR1P49238 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.62□□□□□ -1.67
CX3CR1P49238 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CR1P49238 UGT2A3P7-201ENST00000510485 734 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CR1P49238 HMGB1P40-201ENST00000525121 540 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 EIF4A2P5-201ENST00000529914 499 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CR1P49238 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CR1P49238 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CR1P49238 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CR1P49238 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CX3CR1P49238 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.62□□□□□ -1.67
CX3CR1P49238 MIR4675-201ENST00000577898 77 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CR1P49238 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CR1P49238 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CR1P49238 AC011626.1-201ENST00000604710 562 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CR1P49238 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CR1P49238 AC127024.6-201ENST00000621598 424 ntBASIC4.62□□□□□ -1.67
CX3CR1P49238 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CR1P49238 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CX3CR1P49238 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CX3CR1P49238 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CR1P49238 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CR1P49238 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CR1P49238 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.61□□□□□ -1.67
CX3CR1P49238 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 AC019072.1-201ENST00000604535 1551 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 AC114947.2-201ENST00000565748 2125 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 AC007996.1-201ENST00000620414 2821 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 AC000374.1-201ENST00000434698 1745 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.61□□□□□ -1.67
CX3CR1P49238 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms