Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 SOX5P1-201ENST00000524155 1127 ntBASIC6.09□□□□□ -1.44
SCN4AP35499 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.09□□□□□ -1.44
SCN4AP35499 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
SCN4AP35499 AC020910.3-201ENST00000603701 874 ntBASIC6.09□□□□□ -1.44
SCN4AP35499 AC005191.1-201ENST00000603950 358 ntBASIC6.09□□□□□ -1.44
SCN4AP35499 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SCN4AP35499 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.09□□□□□ -1.44
SCN4AP35499 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.08□□□□□ -1.44
SCN4AP35499 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.08□□□□□ -1.44
SCN4AP35499 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SCN4AP35499 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SCN4AP35499 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 RPL12P34-201ENST00000424532 479 ntBASIC6.08□□□□□ -1.44
SCN4AP35499 AC023141.6-201ENST00000429418 337 ntBASIC6.08□□□□□ -1.44
SCN4AP35499 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN4AP35499 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.08□□□□□ -1.44
SCN4AP35499 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.08□□□□□ -1.44
SCN4AP35499 RN7SL319P-201ENST00000480656 221 ntBASIC6.08□□□□□ -1.44
SCN4AP35499 RN7SL244P-201ENST00000493405 297 ntBASIC6.08□□□□□ -1.44
SCN4AP35499 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.08□□□□□ -1.44
SCN4AP35499 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.08□□□□□ -1.44
SCN4AP35499 AC093388.1-201ENST00000609166 430 ntBASIC6.08□□□□□ -1.44
SCN4AP35499 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.08□□□□□ -1.44
SCN4AP35499 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.08□□□□□ -1.44
SCN4AP35499 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.08□□□□□ -1.44
SCN4AP35499 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN4AP35499 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.08□□□□□ -1.44
SCN4AP35499 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.08□□□□□ -1.44
SCN4AP35499 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.07□□□□□ -1.44
SCN4AP35499 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.07□□□□□ -1.44
SCN4AP35499 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.07□□□□□ -1.44
SCN4AP35499 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCN4AP35499 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.07□□□□□ -1.44
SCN4AP35499 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCN4AP35499 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.07□□□□□ -1.44
SCN4AP35499 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.07□□□□□ -1.44
SCN4AP35499 RN7SKP17-201ENST00000411242 351 ntBASIC6.07□□□□□ -1.44
SCN4AP35499 RPL12P43-201ENST00000420608 499 ntBASIC6.07□□□□□ -1.44
SCN4AP35499 MRPS21P3-201ENST00000436696 262 ntBASIC6.07□□□□□ -1.44
SCN4AP35499 AC005154.2-201ENST00000438110 379 ntBASIC6.07□□□□□ -1.44
SCN4AP35499 AC122718.1-201ENST00000439448 744 ntBASIC6.07□□□□□ -1.44
SCN4AP35499 ARL2BPP10-201ENST00000446487 531 ntBASIC6.07□□□□□ -1.44
SCN4AP35499 FAM133DP-201ENST00000464802 691 ntBASIC6.07□□□□□ -1.44
SCN4AP35499 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.07□□□□□ -1.44
SCN4AP35499 AC093840.1-201ENST00000511599 336 ntBASIC6.07□□□□□ -1.44
SCN4AP35499 AC133555.2-201ENST00000550213 292 ntBASIC6.07□□□□□ -1.44
SCN4AP35499 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.07□□□□□ -1.44
SCN4AP35499 MIR4715-201ENST00000584117 79 ntBASIC6.07□□□□□ -1.44
SCN4AP35499 BNIP3P33-201ENST00000598912 569 ntBASIC6.07□□□□□ -1.44
SCN4AP35499 AC009237.13-201ENST00000603193 276 ntBASIC6.07□□□□□ -1.44
SCN4AP35499 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.07□□□□□ -1.44
SCN4AP35499 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.07□□□□□ -1.44
SCN4AP35499 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.07□□□□□ -1.44
SCN4AP35499 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCN4AP35499 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.07□□□□□ -1.44
SCN4AP35499 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SCN4AP35499 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.07□□□□□ -1.44
SCN4AP35499 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCN4AP35499 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
SCN4AP35499 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
SCN4AP35499 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
SCN4AP35499 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SCN4AP35499 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCN4AP35499 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCN4AP35499 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SCN4AP35499 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SCN4AP35499 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.06□□□□□ -1.44
SCN4AP35499 MIR23B-201ENST00000384832 97 ntBASIC6.06□□□□□ -1.44
SCN4AP35499 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SCN4AP35499 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SCN4AP35499 U3.28-201ENST00000391249 210 ntBASIC6.06□□□□□ -1.44
SCN4AP35499 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC6.06□□□□□ -1.44
SCN4AP35499 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.06□□□□□ -1.44
SCN4AP35499 Z95152.1-201ENST00000453556 656 ntBASIC6.06□□□□□ -1.44
SCN4AP35499 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.06□□□□□ -1.44
SCN4AP35499 PPM1AP1-201ENST00000502740 1135 ntBASIC6.06□□□□□ -1.44
SCN4AP35499 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.06□□□□□ -1.44
SCN4AP35499 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.06□□□□□ -1.44
SCN4AP35499 GAPDHP62-201ENST00000515313 990 ntBASIC6.06□□□□□ -1.44
SCN4AP35499 OR4A43P-201ENST00000532938 908 ntBASIC6.06□□□□□ -1.44
SCN4AP35499 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.06□□□□□ -1.44
SCN4AP35499 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.06□□□□□ -1.44
SCN4AP35499 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.06□□□□□ -1.44
SCN4AP35499 AC025857.2-201ENST00000602711 238 ntBASIC6.06□□□□□ -1.44
SCN4AP35499 AL356218.2-201ENST00000605264 187 ntBASIC6.06□□□□□ -1.44
SCN4AP35499 MIR6716-201ENST00000613413 80 ntBASIC6.06□□□□□ -1.44
SCN4AP35499 AC009951.1-201ENST00000623674 2614 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms