Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 BMI1P1-201ENST00000445879 941 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 AL020997.1-201ENST00000446554 349 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 IGBP1P3-201ENST00000447449 1000 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 AL935212.3-201ENST00000450729 284 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HOXC12P31275 AC116337.2-201ENST00000477662 156 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXC12P31275 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC12P31275 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXC12P31275 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXC12P31275 AC093311.1-201ENST00000506586 2021 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC12P31275 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXC12P31275 AC093281.2-201ENST00000510153 597 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC12P31275 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC12P31275 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC12P31275 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC12P31275 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC12P31275 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXC12P31275 OR8A2P-201ENST00000528631 952 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HOXC12P31275 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXC12P31275 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXC12P31275 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXC12P31275 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC12P31275 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC12P31275 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXC12P31275 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXC12P31275 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXC12P31275 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXC12P31275 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXC12P31275 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXC12P31275 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXC12P31275 MIR4428-201ENST00000584884 73 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC12P31275 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC12P31275 AL078623.1-201ENST00000602702 907 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 AC133552.5-201ENST00000604266 540 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC12P31275 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC12P31275 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 AC100793.4-201ENST00000613683 429 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC12P31275 AL445670.1-201ENST00000618889 801 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 AP005212.3-201ENST00000619964 528 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 MIR6823-201ENST00000622118 61 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 AC007485.2-201ENST00000623493 1667 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 AC135068.5-201ENST00000624197 983 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 AC068870.3-201ENST00000625077 2536 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC12P31275 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC12P31275 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC12P31275 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC12P31275 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.12□□□□□ -1.43
HOXC12P31275 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC12P31275 AC083837.1-201ENST00000565297 2994 ntBASIC6.12□□□□□ -1.43
HOXC12P31275 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC12P31275 CTAGE11P-201ENST00000451540 2353 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 AC097063.1-201ENST00000426714 1797 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 AC015689.2-201ENST00000528172 1738 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC12P31275 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC12P31275 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC12P31275 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC12P31275 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HOXC12P31275 AL353133.1-201ENST00000407695 401 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 RN7SKP91-201ENST00000410852 288 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 RN7SKP108-201ENST00000411367 328 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC12P31275 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC12P31275 THEM7P-201ENST00000419556 672 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 PTPN2P1-201ENST00000423212 1072 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC12P31275 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
HOXC12P31275 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC12P31275 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC12P31275 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC12P31275 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC12P31275 AC008072.1-201ENST00000434254 824 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 RPS25P9-201ENST00000435591 252 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 AC083855.1-201ENST00000440041 258 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 UBE2V1P5-201ENST00000440070 405 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 ZNF114P1-201ENST00000453500 292 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 RPL5P32-201ENST00000454085 879 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 MTCO3P11-201ENST00000455103 774 ntBASIC6.11□□□□□ -1.43
HOXC12P31275 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC12P31275 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC12P31275 RN7SL83P-201ENST00000468131 297 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms