Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.35□□□□□ -1.55
ABCD3P28288 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.35□□□□□ -1.55
ABCD3P28288 RPS17P15-201ENST00000475609 349 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.35□□□□□ -1.55
ABCD3P28288 RPL21P6-201ENST00000479171 504 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 NENFP3-201ENST00000503735 313 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AC090568.1-201ENST00000509499 856 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 SNORA70.20-201ENST00000516848 126 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.35□□□□□ -1.55
ABCD3P28288 IGKV2D-10-201ENST00000520194 281 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AC078899.1-201ENST00000521432 1185 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.35□□□□□ -1.55
ABCD3P28288 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ABCD3P28288 AC079600.1-201ENST00000550326 297 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.35□□□□□ -1.55
ABCD3P28288 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.35□□□□□ -1.55
ABCD3P28288 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.35□□□□□ -1.55
ABCD3P28288 AC027243.2-201ENST00000602530 724 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AC090525.3-201ENST00000605601 189 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AL139022.2-201ENST00000606934 443 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 AP003476.1-201ENST00000623984 516 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AC022919.1-201ENST00000624979 626 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.35□□□□□ -1.55
ABCD3P28288 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.35□□□□□ -1.55
ABCD3P28288 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
ABCD3P28288 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 AC026523.2-201ENST00000625039 7739 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.34□□□□□ -1.55
ABCD3P28288 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.34□□□□□ -1.55
ABCD3P28288 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
ABCD3P28288 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
ABCD3P28288 MIR375-201ENST00000362103 64 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 RNU1-146P-201ENST00000364015 165 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 RNA5SP510-201ENST00000364697 99 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 RN7SKP78-201ENST00000364711 318 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 RN7SKP15-201ENST00000364742 309 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 RNU6-481P-201ENST00000384194 107 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
ABCD3P28288 AL357752.1-201ENST00000412817 349 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.34□□□□□ -1.55
ABCD3P28288 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.34□□□□□ -1.55
ABCD3P28288 AC023128.2-201ENST00000420880 1223 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.34□□□□□ -1.55
ABCD3P28288 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.34□□□□□ -1.55
ABCD3P28288 USP24P1-201ENST00000433802 779 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 AC006994.1-201ENST00000438212 839 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 RPL7P33-201ENST00000444159 742 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.34□□□□□ -1.55
ABCD3P28288 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.34□□□□□ -1.55
ABCD3P28288 HMGN1P5-201ENST00000448591 263 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 AL445665.1-202ENST00000452436 324 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 RPL7AP10-201ENST00000481016 791 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 AC104687.1-201ENST00000485829 412 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.34□□□□□ -1.55
ABCD3P28288 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.34□□□□□ -1.55
ABCD3P28288 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.34□□□□□ -1.55
ABCD3P28288 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.34□□□□□ -1.55
ABCD3P28288 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.34□□□□□ -1.55
ABCD3P28288 AL049830.4-201ENST00000555149 351 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.34□□□□□ -1.55
ABCD3P28288 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.34□□□□□ -1.55
ABCD3P28288 AL163952.1-202ENST00000569625 600 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.34□□□□□ -1.55
ABCD3P28288 AC126365.2-201ENST00000580630 379 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 OR2BH1P-201ENST00000608850 864 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 AC078880.5-201ENST00000617845 421 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 AP001962.1-201ENST00000624114 559 ntBASIC5.34□□□□□ -1.55
ABCD3P28288 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.34□□□□□ -1.55
ABCD3P28288 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.34□□□□□ -1.55
ABCD3P28288 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ABCD3P28288 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ABCD3P28288 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ABCD3P28288 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ABCD3P28288 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
ABCD3P28288 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms