Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
VARSP26640 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.53□□□□□ -1.2
VARSP26640 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
VARSP26640 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.2
VARSP26640 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.52□□□□□ -1.2
VARSP26640 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.52□□□□□ -1.21
VARSP26640 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARSP26640 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
VARSP26640 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARSP26640 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.52□□□□□ -1.21
VARSP26640 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
VARSP26640 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
VARSP26640 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARSP26640 AC024560.2-201ENST00000507981 1497 ntBASIC7.52□□□□□ -1.21
VARSP26640 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARSP26640 RNA5SP463-201ENST00000363030 120 ntBASIC7.52□□□□□ -1.21
VARSP26640 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARSP26640 RNU6-43P-201ENST00000384302 107 ntBASIC7.52□□□□□ -1.21
VARSP26640 RN7SKP129-201ENST00000410288 299 ntBASIC7.52□□□□□ -1.21
VARSP26640 RNA5SP231-201ENST00000410496 138 ntBASIC7.52□□□□□ -1.21
VARSP26640 RNU6-373P-201ENST00000411247 98 ntBASIC7.52□□□□□ -1.21
VARSP26640 AC083875.1-201ENST00000419509 405 ntBASIC7.52□□□□□ -1.21
VARSP26640 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC7.52□□□□□ -1.21
VARSP26640 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.52□□□□□ -1.21
VARSP26640 AL358176.2-201ENST00000425769 204 ntBASIC7.52□□□□□ -1.21
VARSP26640 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC7.52□□□□□ -1.21
VARSP26640 SKP1P1-201ENST00000438081 489 ntBASIC7.52□□□□□ -1.21
VARSP26640 CR391992.1-201ENST00000438601 394 ntBASIC7.52□□□□□ -1.21
VARSP26640 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
VARSP26640 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC7.52□□□□□ -1.21
VARSP26640 MTND1P12-201ENST00000455231 147 ntBASIC7.52□□□□□ -1.21
VARSP26640 MTND1P3-201ENST00000484956 952 ntBASIC7.52□□□□□ -1.21
VARSP26640 OR7E99P-201ENST00000505750 922 ntBASIC7.52□□□□□ -1.21
VARSP26640 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.52□□□□□ -1.21
VARSP26640 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.52□□□□□ -1.21
VARSP26640 Y_RNA.711-201ENST00000516993 102 ntBASIC7.52□□□□□ -1.21
VARSP26640 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
VARSP26640 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC7.52□□□□□ -1.21
VARSP26640 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC7.52□□□□□ -1.21
VARSP26640 AC103855.4-201ENST00000533158 265 ntBASIC7.52□□□□□ -1.21
VARSP26640 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC7.52□□□□□ -1.21
VARSP26640 AL121594.2-201ENST00000541658 472 ntBASIC7.52□□□□□ -1.21
VARSP26640 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.52□□□□□ -1.21
VARSP26640 AC091304.5-201ENST00000568969 158 ntBASIC7.52□□□□□ -1.21
VARSP26640 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.52□□□□□ -1.21
VARSP26640 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.52□□□□□ -1.21
VARSP26640 AC068802.1-201ENST00000603420 732 ntBASIC7.52□□□□□ -1.21
VARSP26640 AC004908.2-201ENST00000609090 574 ntBASIC7.52□□□□□ -1.21
VARSP26640 MIR6761-201ENST00000617899 72 ntBASIC7.52□□□□□ -1.21
VARSP26640 AC015908.5-201ENST00000623289 343 ntBASIC7.52□□□□□ -1.21
VARSP26640 AL049541.2-201ENST00000626377 555 ntBASIC7.52□□□□□ -1.21
VARSP26640 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.52□□□□□ -1.21
VARSP26640 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARSP26640 MKKS-204ENST00000639674 192 ntBASIC7.52□□□□□ -1.21
VARSP26640 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.52□□□□□ -1.21
VARSP26640 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.52□□□□□ -1.21
VARSP26640 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
VARSP26640 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
VARSP26640 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARSP26640 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
VARSP26640 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.52□□□□□ -1.21
VARSP26640 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARSP26640 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARSP26640 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
VARSP26640 LINC02128-205ENST00000641755 1334 ntBASIC7.52□□□□□ -1.21
VARSP26640 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.52□□□□□ -1.21
VARSP26640 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.52□□□□□ -1.21
VARSP26640 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
VARSP26640 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
VARSP26640 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARSP26640 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARSP26640 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
VARSP26640 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARSP26640 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARSP26640 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC7.51□□□□□ -1.21
VARSP26640 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.51□□□□□ -1.21
VARSP26640 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
VARSP26640 NMD3P1-201ENST00000439704 1488 ntBASIC7.51□□□□□ -1.21
VARSP26640 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
VARSP26640 OR5M2P-202ENST00000641241 4242 ntBASIC7.51□□□□□ -1.21
VARSP26640 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARSP26640 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VARSP26640 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
VARSP26640 U3.1-201ENST00000362500 215 ntBASIC7.51□□□□□ -1.21
VARSP26640 RNU6-1066P-201ENST00000363573 105 ntBASIC7.51□□□□□ -1.21
VARSP26640 RN7SKP257-201ENST00000364525 309 ntBASIC7.51□□□□□ -1.21
VARSP26640 RNU6-784P-201ENST00000384330 106 ntBASIC7.51□□□□□ -1.21
VARSP26640 AL162578.1-201ENST00000406202 378 ntBASIC7.51□□□□□ -1.21
VARSP26640 YWHAZP3-201ENST00000415292 738 ntBASIC7.51□□□□□ -1.21
VARSP26640 AC017104.2-201ENST00000417000 321 ntBASIC7.51□□□□□ -1.21
VARSP26640 HSPE1P16-201ENST00000426640 348 ntBASIC7.51□□□□□ -1.21
VARSP26640 AP001324.1-201ENST00000428553 399 ntBASIC7.51□□□□□ -1.21
VARSP26640 RPL31P35-201ENST00000431058 377 ntBASIC7.51□□□□□ -1.21
VARSP26640 RPL35P8-201ENST00000433284 337 ntBASIC7.51□□□□□ -1.21
VARSP26640 PHBP4-201ENST00000437447 837 ntBASIC7.51□□□□□ -1.21
VARSP26640 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC7.51□□□□□ -1.21
VARSP26640 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.51□□□□□ -1.21
VARSP26640 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.51□□□□□ -1.21
VARSP26640 MTND5P22-201ENST00000458380 195 ntBASIC7.51□□□□□ -1.21
VARSP26640 AC109454.1-201ENST00000471205 498 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms