Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC073348.1-201ENST00000623002 331 ntBASIC5.68□□□□□ -1.5
CD40P25942 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.68□□□□□ -1.5
CD40P25942 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.68□□□□□ -1.5
CD40P25942 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.68□□□□□ -1.5
CD40P25942 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 AC092821.2-201ENST00000545710 2042 ntBASIC5.68□□□□□ -1.5
CD40P25942 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CD40P25942 AC023245.2-201ENST00000530760 2978 ntBASIC5.68□□□□□ -1.5
CD40P25942 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CD40P25942 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.68□□□□□ -1.5
CD40P25942 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 AC011477.1-204ENST00000623416 1325 ntBASIC5.68□□□□□ -1.5
CD40P25942 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC5.68□□□□□ -1.5
CD40P25942 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.68□□□□□ -1.5
CD40P25942 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.68□□□□□ -1.5
CD40P25942 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 PROS2P-201ENST00000474651 1951 ntBASIC5.67□□□□□ -1.5
CD40P25942 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 AC092104.1-201ENST00000497346 1441 ntBASIC5.67□□□□□ -1.5
CD40P25942 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.67□□□□□ -1.5
CD40P25942 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CD40P25942 NCOA4P3-201ENST00000513203 1877 ntBASIC5.67□□□□□ -1.5
CD40P25942 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC5.67□□□□□ -1.5
CD40P25942 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.67□□□□□ -1.5
CD40P25942 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CD40P25942 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CD40P25942 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.67□□□□□ -1.5
CD40P25942 RNA5SP512-201ENST00000364550 120 ntBASIC5.67□□□□□ -1.5
CD40P25942 RNU6-621P-201ENST00000364752 109 ntBASIC5.67□□□□□ -1.5
CD40P25942 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.67□□□□□ -1.5
CD40P25942 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 RPL5P20-201ENST00000403848 896 ntBASIC5.67□□□□□ -1.5
CD40P25942 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC5.67□□□□□ -1.5
CD40P25942 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.67□□□□□ -1.5
CD40P25942 Y_RNA.599-201ENST00000410489 109 ntBASIC5.67□□□□□ -1.5
CD40P25942 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.67□□□□□ -1.5
CD40P25942 AL445213.1-201ENST00000412589 747 ntBASIC5.67□□□□□ -1.5
CD40P25942 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 AC007559.1-201ENST00000428736 355 ntBASIC5.67□□□□□ -1.5
CD40P25942 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.67□□□□□ -1.5
CD40P25942 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.67□□□□□ -1.5
CD40P25942 RPS25P9-201ENST00000435591 252 ntBASIC5.67□□□□□ -1.5
CD40P25942 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.67□□□□□ -1.5
CD40P25942 CEACAMP5-201ENST00000448037 961 ntBASIC5.67□□□□□ -1.5
CD40P25942 AL034418.1-201ENST00000448675 860 ntBASIC5.67□□□□□ -1.5
CD40P25942 OR52J1P-201ENST00000450596 932 ntBASIC5.67□□□□□ -1.5
CD40P25942 OR52E7P-201ENST00000452394 933 ntBASIC5.67□□□□□ -1.5
CD40P25942 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.67□□□□□ -1.5
CD40P25942 RN7SL39P-201ENST00000462264 297 ntBASIC5.67□□□□□ -1.5
CD40P25942 RN7SL168P-201ENST00000463821 279 ntBASIC5.67□□□□□ -1.5
CD40P25942 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 SETP11-201ENST00000473027 690 ntBASIC5.67□□□□□ -1.5
CD40P25942 RPS7P6-201ENST00000485777 579 ntBASIC5.67□□□□□ -1.5
CD40P25942 RPS27P23-201ENST00000487608 251 ntBASIC5.67□□□□□ -1.5
CD40P25942 RN7SL561P-201ENST00000488553 281 ntBASIC5.67□□□□□ -1.5
CD40P25942 AC106822.1-201ENST00000502647 526 ntBASIC5.67□□□□□ -1.5
CD40P25942 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.67□□□□□ -1.5
CD40P25942 AC011352.3-201ENST00000505162 593 ntBASIC5.67□□□□□ -1.5
CD40P25942 TCP11X3P-202ENST00000514289 1254 ntBASIC5.67□□□□□ -1.5
CD40P25942 RN7SKP283-201ENST00000517197 270 ntBASIC5.67□□□□□ -1.5
CD40P25942 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.67□□□□□ -1.5
CD40P25942 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.67□□□□□ -1.5
CD40P25942 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD40P25942 IGKV2-36-201ENST00000519999 223 ntBASIC5.67□□□□□ -1.5
CD40P25942 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.67□□□□□ -1.5
CD40P25942 HIGD1AP10-201ENST00000527837 282 ntBASIC5.67□□□□□ -1.5
CD40P25942 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.67□□□□□ -1.5
CD40P25942 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.67□□□□□ -1.5
CD40P25942 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.67□□□□□ -1.5
CD40P25942 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.67□□□□□ -1.5
CD40P25942 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.67□□□□□ -1.5
CD40P25942 MRPS21P9-201ENST00000571150 257 ntBASIC5.67□□□□□ -1.5
CD40P25942 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.67□□□□□ -1.5
CD40P25942 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.67□□□□□ -1.5
CD40P25942 AL157899.1-201ENST00000604110 936 ntBASIC5.67□□□□□ -1.5
CD40P25942 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.67□□□□□ -1.5
CD40P25942 AL451049.1-201ENST00000608672 497 ntBASIC5.67□□□□□ -1.5
CD40P25942 AC004948.1-201ENST00000609858 672 ntBASIC5.67□□□□□ -1.5
CD40P25942 AP000254.1-201ENST00000609934 520 ntBASIC5.67□□□□□ -1.5
CD40P25942 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CD40P25942 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms