Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RFX1P22670 NTS-203ENST00000551529 801 ntTSL 3 BASIC7.64□□□□□ -1.19
RFX1P22670 PSMB7P1-201ENST00000556349 514 ntBASIC7.64□□□□□ -1.19
RFX1P22670 TRAV15-201ENST00000556680 249 ntBASIC7.64□□□□□ -1.19
RFX1P22670 AC084757.1-201ENST00000559987 490 ntBASIC7.64□□□□□ -1.19
RFX1P22670 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.64□□□□□ -1.19
RFX1P22670 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.64□□□□□ -1.19
RFX1P22670 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.64□□□□□ -1.19
RFX1P22670 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.64□□□□□ -1.19
RFX1P22670 AC024267.2-201ENST00000582737 417 ntBASIC7.64□□□□□ -1.19
RFX1P22670 AL596327.1-201ENST00000603629 213 ntBASIC7.64□□□□□ -1.19
RFX1P22670 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.64□□□□□ -1.19
RFX1P22670 RNU6-88P-201ENST00000606801 100 ntBASIC7.64□□□□□ -1.19
RFX1P22670 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
RFX1P22670 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RFX1P22670 OR11H2-202ENST00000641517 1085 ntBASIC7.64□□□□□ -1.19
RFX1P22670 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.64□□□□□ -1.19
RFX1P22670 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RFX1P22670 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
RFX1P22670 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.64□□□□□ -1.19
RFX1P22670 AL021877.2-201ENST00000624442 10684 ntBASIC7.64□□□□□ -1.19
RFX1P22670 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
RFX1P22670 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.64□□□□□ -1.19
RFX1P22670 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
RFX1P22670 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RFX1P22670 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RFX1P22670 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.63□□□□□ -1.19
RFX1P22670 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
RFX1P22670 RLIMP2-201ENST00000427891 1563 ntBASIC7.63□□□□□ -1.19
RFX1P22670 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
RFX1P22670 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
RFX1P22670 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.63□□□□□ -1.19
RFX1P22670 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.63□□□□□ -1.19
RFX1P22670 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RFX1P22670 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 RNA5SP472-201ENST00000363868 119 ntBASIC7.63□□□□□ -1.19
RFX1P22670 MIR152-201ENST00000385212 87 ntBASIC7.63□□□□□ -1.19
RFX1P22670 MIR137-201ENST00000385223 102 ntBASIC7.63□□□□□ -1.19
RFX1P22670 MIR1266-201ENST00000408125 84 ntBASIC7.63□□□□□ -1.19
RFX1P22670 RN7SKP148-201ENST00000410179 275 ntBASIC7.63□□□□□ -1.19
RFX1P22670 RN7SKP146-201ENST00000410242 334 ntBASIC7.63□□□□□ -1.19
RFX1P22670 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.63□□□□□ -1.19
RFX1P22670 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.63□□□□□ -1.19
RFX1P22670 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.63□□□□□ -1.19
RFX1P22670 DNAJC19P4-201ENST00000440115 345 ntBASIC7.63□□□□□ -1.19
RFX1P22670 ARAFP2-201ENST00000440565 559 ntBASIC7.63□□□□□ -1.19
RFX1P22670 AC064862.5-201ENST00000440618 334 ntBASIC7.63□□□□□ -1.19
RFX1P22670 AC234771.4-201ENST00000441416 730 ntBASIC7.63□□□□□ -1.19
RFX1P22670 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.63□□□□□ -1.19
RFX1P22670 YWHAQP9-201ENST00000445891 512 ntBASIC7.63□□□□□ -1.19
RFX1P22670 RPL7P59-201ENST00000447700 943 ntBASIC7.63□□□□□ -1.19
RFX1P22670 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC7.63□□□□□ -1.19
RFX1P22670 RPL31P11-202ENST00000454082 372 ntBASIC7.63□□□□□ -1.19
RFX1P22670 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.63□□□□□ -1.19
RFX1P22670 AC112206.1-201ENST00000468416 477 ntBASIC7.63□□□□□ -1.19
RFX1P22670 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC7.63□□□□□ -1.19
RFX1P22670 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC7.63□□□□□ -1.19
RFX1P22670 COX6B1P6-201ENST00000522347 255 ntBASIC7.63□□□□□ -1.19
RFX1P22670 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.63□□□□□ -1.19
RFX1P22670 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.63□□□□□ -1.19
RFX1P22670 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC7.63□□□□□ -1.19
RFX1P22670 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.63□□□□□ -1.19
RFX1P22670 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.63□□□□□ -1.19
RFX1P22670 AC137768.1-201ENST00000549998 553 ntBASIC7.63□□□□□ -1.19
RFX1P22670 AC023310.2-201ENST00000553844 547 ntBASIC7.63□□□□□ -1.19
RFX1P22670 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC7.63□□□□□ -1.19
RFX1P22670 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.63□□□□□ -1.19
RFX1P22670 AP005205.1-201ENST00000563503 508 ntBASIC7.63□□□□□ -1.19
RFX1P22670 AC138915.2-201ENST00000569776 97 ntBASIC7.63□□□□□ -1.19
RFX1P22670 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC7.63□□□□□ -1.19
RFX1P22670 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.63□□□□□ -1.19
RFX1P22670 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.63□□□□□ -1.19
RFX1P22670 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.63□□□□□ -1.19
RFX1P22670 AC020765.1-201ENST00000604296 328 ntBASIC7.63□□□□□ -1.19
RFX1P22670 AC069304.2-201ENST00000605154 435 ntBASIC7.63□□□□□ -1.19
RFX1P22670 AC122710.3-201ENST00000606566 541 ntBASIC7.63□□□□□ -1.19
RFX1P22670 AF250324.2-201ENST00000608299 610 ntBASIC7.63□□□□□ -1.19
RFX1P22670 AC245407.2-201ENST00000614199 451 ntBASIC7.63□□□□□ -1.19
RFX1P22670 AL049541.2-201ENST00000626377 555 ntBASIC7.63□□□□□ -1.19
RFX1P22670 OR7E161P-202ENST00000641994 1033 ntBASIC7.63□□□□□ -1.19
RFX1P22670 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.63□□□□□ -1.19
RFX1P22670 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.63□□□□□ -1.19
RFX1P22670 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
RFX1P22670 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RFX1P22670 AC005839.1-201ENST00000624148 3213 ntBASIC7.63□□□□□ -1.19
RFX1P22670 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms