Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
COL9A1P20849 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC8.02□□□□□ -1.13
COL9A1P20849 NRK-204ENST00000540278 1687 ntTSL 2 BASIC8.02□□□□□ -1.13
COL9A1P20849 AC008985.1-201ENST00000624169 2239 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
COL9A1P20849 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
COL9A1P20849 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL9A1P20849 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
COL9A1P20849 XRCC6P2-201ENST00000457831 1822 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC8.02□□□□□ -1.13
COL9A1P20849 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
COL9A1P20849 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
COL9A1P20849 SNRPEP3-201ENST00000338402 276 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 Y_RNA.46-201ENST00000362695 102 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 Y_RNA.117-201ENST00000363294 101 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 RNU6-99P-201ENST00000364721 107 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 RNU6-33P-201ENST00000384793 107 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 RN7SKP158-201ENST00000410453 326 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 RNU6-193P-201ENST00000410977 107 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 RNA5SP115-201ENST00000411160 107 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 AL357752.1-201ENST00000412817 349 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 RPL7P10-201ENST00000417407 739 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC8.02□□□□□ -1.13
COL9A1P20849 RBMY2GP-201ENST00000418671 1034 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC8.02□□□□□ -1.13
COL9A1P20849 RBMY2NP-201ENST00000434454 1028 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 HMGB3P10-201ENST00000434734 572 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 RPS18P1-201ENST00000447840 458 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC8.02□□□□□ -1.13
COL9A1P20849 RPL7P15-201ENST00000461190 712 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 SLC25A51P1-201ENST00000468432 871 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC8.02□□□□□ -1.13
COL9A1P20849 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC8.02□□□□□ -1.13
COL9A1P20849 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC8.02□□□□□ -1.13
COL9A1P20849 AC011853.1-201ENST00000518911 454 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 IGKV3D-34-201ENST00000522638 302 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 IGHVIII-76-1-201ENST00000523776 286 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 NDUFA3P2-201ENST00000531434 232 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC8.02□□□□□ -1.13
COL9A1P20849 POLR2KP1-201ENST00000553226 168 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 AL845552.1-201ENST00000556820 323 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC8.02□□□□□ -1.13
COL9A1P20849 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC8.02□□□□□ -1.13
COL9A1P20849 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.02□□□□□ -1.13
COL9A1P20849 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC8.02□□□□□ -1.13
COL9A1P20849 AC243830.2-201ENST00000618067 630 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 AC007546.1-201ENST00000619452 559 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 AC073592.6-201ENST00000624271 415 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC8.02□□□□□ -1.13
COL9A1P20849 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL9A1P20849 FRMD7-201ENST00000298542 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL9A1P20849 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL9A1P20849 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC8.02□□□□□ -1.13
COL9A1P20849 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL9A1P20849 SF3A3-201ENST00000373019 3673 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL9A1P20849 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
COL9A1P20849 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8.02□□□□□ -1.13
COL9A1P20849 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL9A1P20849 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC8.02□□□□□ -1.13
COL9A1P20849 ASNSP3-201ENST00000451989 1306 ntBASIC8.02□□□□□ -1.13
COL9A1P20849 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
COL9A1P20849 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC8.02□□□□□ -1.13
COL9A1P20849 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC8.02□□□□□ -1.13
COL9A1P20849 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL9A1P20849 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 AL049641.1-201ENST00000441055 1948 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 EXT2-203ENST00000395673 3454 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 MOBP-201ENST00000311042 3388 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
COL9A1P20849 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
COL9A1P20849 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC8.01□□□□□ -1.13
COL9A1P20849 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC8.01□□□□□ -1.13
COL9A1P20849 MFF-206ENST00000392059 1710 ntTSL 5 BASIC8.01□□□□□ -1.13
COL9A1P20849 ZNF101P1-201ENST00000435701 1720 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC8.01□□□□□ -1.13
COL9A1P20849 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
COL9A1P20849 ODF3-202ENST00000342593 386 ntTSL 5 BASIC8.01□□□□□ -1.13
COL9A1P20849 RNY1P12-201ENST00000364251 105 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 SNORD37.1-201ENST00000390968 65 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 MIR548F5-201ENST00000408421 86 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 HNRNPDLP1-201ENST00000412834 550 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 RBMY2KP-201ENST00000418221 992 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 AC018865.2-201ENST00000423631 129 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 AL353777.1-201ENST00000425552 326 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC8.01□□□□□ -1.13
COL9A1P20849 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
COL9A1P20849 RPL7P52-201ENST00000449200 742 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC8.01□□□□□ -1.13
COL9A1P20849 AL590326.1-201ENST00000460857 334 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.01□□□□□ -1.13
COL9A1P20849 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC8.01□□□□□ -1.13
COL9A1P20849 RN7SL335P-201ENST00000482790 304 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms