Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.12□□□□□ -1.43
TOP1P11387 AL445222.1-201ENST00000607259 628 ntBASIC6.12□□□□□ -1.43
TOP1P11387 AL021707.7-201ENST00000607991 416 ntBASIC6.12□□□□□ -1.43
TOP1P11387 AC009163.6-201ENST00000612367 342 ntBASIC6.12□□□□□ -1.43
TOP1P11387 AC037198.3-201ENST00000616754 526 ntBASIC6.12□□□□□ -1.43
TOP1P11387 AL138820.1-201ENST00000617901 5305 ntBASIC6.12□□□□□ -1.43
TOP1P11387 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.12□□□□□ -1.43
TOP1P11387 AC093909.5-201ENST00000621839 1799 ntBASIC6.12□□□□□ -1.43
TOP1P11387 AL031595.2-201ENST00000624215 19071 ntBASIC6.12□□□□□ -1.43
TOP1P11387 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.12□□□□□ -1.43
TOP1P11387 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TOP1P11387 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
TOP1P11387 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TOP1P11387 AC097063.1-201ENST00000426714 1797 ntBASIC6.11□□□□□ -1.43
TOP1P11387 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
TOP1P11387 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.11□□□□□ -1.43
TOP1P11387 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TOP1P11387 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.11□□□□□ -1.43
TOP1P11387 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.11□□□□□ -1.43
TOP1P11387 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.11□□□□□ -1.43
TOP1P11387 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.11□□□□□ -1.43
TOP1P11387 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.11□□□□□ -1.43
TOP1P11387 HMGN2P27-201ENST00000427352 270 ntBASIC6.11□□□□□ -1.43
TOP1P11387 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TOP1P11387 AL161722.2-201ENST00000434731 981 ntBASIC6.11□□□□□ -1.43
TOP1P11387 RPS29P10-201ENST00000439197 166 ntBASIC6.11□□□□□ -1.43
TOP1P11387 RPS12P31-201ENST00000491419 398 ntBASIC6.11□□□□□ -1.43
TOP1P11387 EIF3KP3-201ENST00000514461 639 ntBASIC6.11□□□□□ -1.43
TOP1P11387 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.11□□□□□ -1.43
TOP1P11387 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.11□□□□□ -1.43
TOP1P11387 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.11□□□□□ -1.43
TOP1P11387 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.11□□□□□ -1.43
TOP1P11387 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TOP1P11387 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TOP1P11387 AP005131.7-201ENST00000610087 611 ntBASIC6.11□□□□□ -1.43
TOP1P11387 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.11□□□□□ -1.43
TOP1P11387 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.11□□□□□ -1.43
TOP1P11387 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.11□□□□□ -1.43
TOP1P11387 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TOP1P11387 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.11□□□□□ -1.43
TOP1P11387 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TOP1P11387 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.1□□□□□ -1.43
TOP1P11387 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TOP1P11387 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TOP1P11387 AC026523.2-201ENST00000625039 7739 ntBASIC6.1□□□□□ -1.43
TOP1P11387 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TOP1P11387 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TOP1P11387 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.1□□□□□ -1.43
TOP1P11387 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TOP1P11387 AC007342.5-201ENST00000571340 2142 ntBASIC6.1□□□□□ -1.43
TOP1P11387 CASC19-255ENST00000641733 1385 ntBASIC6.1□□□□□ -1.43
TOP1P11387 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
TOP1P11387 AC010266.2-201ENST00000564741 3255 ntBASIC6.1□□□□□ -1.43
TOP1P11387 CDC27P2-201ENST00000425026 1922 ntBASIC6.1□□□□□ -1.43
TOP1P11387 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.1□□□□□ -1.43
TOP1P11387 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.1□□□□□ -1.43
TOP1P11387 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TOP1P11387 MIR589-201ENST00000385238 99 ntBASIC6.1□□□□□ -1.43
TOP1P11387 AL645927.1-201ENST00000396783 406 ntBASIC6.1□□□□□ -1.43
TOP1P11387 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TOP1P11387 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.1□□□□□ -1.43
TOP1P11387 RPL7AP49-201ENST00000429522 581 ntBASIC6.1□□□□□ -1.43
TOP1P11387 AL591438.1-201ENST00000433508 581 ntBASIC6.1□□□□□ -1.43
TOP1P11387 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.1□□□□□ -1.43
TOP1P11387 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.1□□□□□ -1.43
TOP1P11387 AC090804.1-201ENST00000448870 490 ntBASIC6.1□□□□□ -1.43
TOP1P11387 OR52E3P-201ENST00000452083 936 ntBASIC6.1□□□□□ -1.43
TOP1P11387 AC092647.2-201ENST00000452998 253 ntBASIC6.1□□□□□ -1.43
TOP1P11387 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.1□□□□□ -1.43
TOP1P11387 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.1□□□□□ -1.43
TOP1P11387 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.1□□□□□ -1.43
TOP1P11387 AC109462.1-201ENST00000491087 368 ntBASIC6.1□□□□□ -1.43
TOP1P11387 RN7SL808P-201ENST00000496066 299 ntBASIC6.1□□□□□ -1.43
TOP1P11387 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.1□□□□□ -1.43
TOP1P11387 AC147055.3-201ENST00000510547 851 ntBASIC6.1□□□□□ -1.43
TOP1P11387 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TOP1P11387 AP002373.2-201ENST00000541631 1060 ntBASIC6.1□□□□□ -1.43
TOP1P11387 RN7SL708P-201ENST00000580952 299 ntBASIC6.1□□□□□ -1.43
TOP1P11387 AC011626.1-201ENST00000604710 562 ntBASIC6.1□□□□□ -1.43
TOP1P11387 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
TOP1P11387 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TOP1P11387 AC023421.1-201ENST00000590535 1785 ntBASIC6.1□□□□□ -1.43
TOP1P11387 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TOP1P11387 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
TOP1P11387 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TOP1P11387 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.09□□□□□ -1.43
TOP1P11387 RNA5SP305-201ENST00000362665 119 ntBASIC6.09□□□□□ -1.43
TOP1P11387 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TOP1P11387 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.09□□□□□ -1.43
TOP1P11387 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.09□□□□□ -1.43
TOP1P11387 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.09□□□□□ -1.43
TOP1P11387 AC090018.1-201ENST00000434369 367 ntBASIC6.09□□□□□ -1.43
TOP1P11387 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.09□□□□□ -1.43
TOP1P11387 GAPDHP58-201ENST00000438477 1006 ntBASIC6.09□□□□□ -1.43
TOP1P11387 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.09□□□□□ -1.43
TOP1P11387 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.09□□□□□ -1.43
TOP1P11387 RPL7AP6-201ENST00000477943 801 ntBASIC6.09□□□□□ -1.43
TOP1P11387 AC090114.3-201ENST00000479267 829 ntBASIC6.09□□□□□ -1.43
TOP1P11387 AC008410.1-201ENST00000483777 339 ntBASIC6.09□□□□□ -1.43
TOP1P11387 AC004453.1-201ENST00000487895 408 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms