Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AC092121.1-201ENST00000569452 202 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 MIR4443-201ENST00000585052 53 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AL606834.2-201ENST00000602954 668 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AP003392.5-201ENST00000607857 415 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AL512624.1-201ENST00000613638 469 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 RBM12B-AS1-201ENST00000623283 653 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 AC119674.1-204ENST00000641348 1343 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 VN2R3P-201ENST00000422626 1412 ntBASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
CSB-PGBD3P0DP91 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC007485.2-201ENST00000623493 1667 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 FAM133CP-201ENST00000332869 704 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 RNU6-553P-201ENST00000364047 96 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 RNA5SP242-201ENST00000364171 118 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 RN7SKP121-201ENST00000410842 305 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 CDK8P2-201ENST00000415020 547 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AK4P4-201ENST00000419465 646 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 DPRXP1-201ENST00000426312 460 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 RPS7P14-201ENST00000426405 583 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 OFD1P13Y-201ENST00000431179 1232 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC093716.1-201ENST00000435923 377 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 Z74696.2-201ENST00000436514 498 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 USP9YP22-201ENST00000438971 294 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC068724.1-201ENST00000487100 792 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 HPRT1P2-201ENST00000505250 544 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC027308.1-201ENST00000517993 110 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 MAL2-207ENST00000522828 603 ntTSL 3 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 IGHVIII-67-4-201ENST00000524281 296 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 RBM22P12-201ENST00000567098 1255 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 MIR3611-201ENST00000584484 83 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 MRO-208ENST00000588444 866 ntTSL 3 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC138749.5-201ENST00000611461 208 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC025253.1-201ENST00000613623 543 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC122133.1-201ENST00000613964 233 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AL162574.1-201ENST00000615702 950 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AL356121.2-201ENST00000624715 780 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 AF131215.2-201ENST00000531549 1710 ntBASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CSB-PGBD3P0DP91 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 MAPK10-270ENST00000641102 3538 ntBASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
CSB-PGBD3P0DP91 TMSB4XP2-201ENST00000335179 210 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms