Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
FREM3P0C091 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
FREM3P0C091 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FREM3P0C091 AC073429.2-201ENST00000569694 1444 ntBASIC4.62□□□□□ -1.67
FREM3P0C091 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.62□□□□□ -1.67
FREM3P0C091 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FREM3P0C091 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FREM3P0C091 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
FREM3P0C091 THAP12P4-201ENST00000528321 2266 ntBASIC4.62□□□□□ -1.67
FREM3P0C091 AC103591.2-201ENST00000265259 766 ntBASIC4.62□□□□□ -1.67
FREM3P0C091 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
FREM3P0C091 MIR765-201ENST00000390226 114 ntBASIC4.62□□□□□ -1.67
FREM3P0C091 COX6B1P1-201ENST00000415962 213 ntBASIC4.62□□□□□ -1.67
FREM3P0C091 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.62□□□□□ -1.67
FREM3P0C091 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.62□□□□□ -1.67
FREM3P0C091 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.62□□□□□ -1.67
FREM3P0C091 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.62□□□□□ -1.67
FREM3P0C091 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.62□□□□□ -1.67
FREM3P0C091 GCSHP4-201ENST00000538792 439 ntBASIC4.62□□□□□ -1.67
FREM3P0C091 AC040958.1-201ENST00000561102 201 ntBASIC4.62□□□□□ -1.67
FREM3P0C091 AC022884.2-201ENST00000578535 580 ntBASIC4.62□□□□□ -1.67
FREM3P0C091 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.62□□□□□ -1.67
FREM3P0C091 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.62□□□□□ -1.67
FREM3P0C091 SAMMSON-227ENST00000642114 1199 ntBASIC4.62□□□□□ -1.67
FREM3P0C091 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FREM3P0C091 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
FREM3P0C091 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.62□□□□□ -1.67
FREM3P0C091 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
FREM3P0C091 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.62□□□□□ -1.67
FREM3P0C091 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FREM3P0C091 AC007996.1-201ENST00000620414 2821 ntBASIC4.62□□□□□ -1.67
FREM3P0C091 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FREM3P0C091 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
FREM3P0C091 AL022322.2-201ENST00000624072 20397 ntBASIC4.62□□□□□ -1.67
FREM3P0C091 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
FREM3P0C091 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FREM3P0C091 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
FREM3P0C091 U3.3-201ENST00000362986 216 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.61□□□□□ -1.67
FREM3P0C091 AP000534.2-201ENST00000412729 568 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 MGAT2P2-201ENST00000427194 797 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.61□□□□□ -1.67
FREM3P0C091 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.61□□□□□ -1.67
FREM3P0C091 RPL12P3-201ENST00000440080 396 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 OR7E125P-201ENST00000443450 846 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 GAPDHP14-201ENST00000450472 937 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 RN7SL610P-201ENST00000463845 291 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FREM3P0C091 RNA5SP43-201ENST00000516559 110 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 RNA5SP392-201ENST00000516905 112 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.61□□□□□ -1.67
FREM3P0C091 OR7E128P-201ENST00000532736 1024 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.61□□□□□ -1.67
FREM3P0C091 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.61□□□□□ -1.67
FREM3P0C091 OR1F2P-201ENST00000570470 933 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 AC011453.2-201ENST00000603737 729 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
FREM3P0C091 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
FREM3P0C091 SMG1P7-201ENST00000565246 2704 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FREM3P0C091 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FREM3P0C091 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FREM3P0C091 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FREM3P0C091 AC092376.2-201ENST00000622621 4116 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.61□□□□□ -1.67
FREM3P0C091 CASC19-281ENST00000642118 1554 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC4.61□□□□□ -1.67
FREM3P0C091 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.61□□□□□ -1.67
FREM3P0C091 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.61□□□□□ -1.67
FREM3P0C091 AC092647.3-201ENST00000443044 633 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 AC090602.1-201ENST00000469695 252 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.61□□□□□ -1.67
FREM3P0C091 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.61□□□□□ -1.67
FREM3P0C091 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.61□□□□□ -1.67
FREM3P0C091 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.61□□□□□ -1.67
FREM3P0C091 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
FREM3P0C091 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.61□□□□□ -1.67
FREM3P0C091 AL049840.6-202ENST00000603373 279 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 Mico1.1-201ENST00000611698 204 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 AF117829.2-201ENST00000619538 361 ntBASIC4.61□□□□□ -1.67
FREM3P0C091 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FREM3P0C091 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FREM3P0C091 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FREM3P0C091 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
FREM3P0C091 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FREM3P0C091 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FREM3P0C091 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.6□□□□□ -1.67
FREM3P0C091 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
FREM3P0C091 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.6□□□□□ -1.67
FREM3P0C091 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FREM3P0C091 AC068138.1-201ENST00000412635 217 ntBASIC4.6□□□□□ -1.67
FREM3P0C091 AL139128.1-201ENST00000413921 941 ntBASIC4.6□□□□□ -1.67
FREM3P0C091 QRSL1P2-201ENST00000418582 964 ntBASIC4.6□□□□□ -1.67
FREM3P0C091 AL136231.1-201ENST00000429407 730 ntBASIC4.6□□□□□ -1.67
FREM3P0C091 AC016772.1-201ENST00000444170 1261 ntBASIC4.6□□□□□ -1.67
FREM3P0C091 TCEA1P1-201ENST00000449716 880 ntBASIC4.6□□□□□ -1.67
FREM3P0C091 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.6□□□□□ -1.67
FREM3P0C091 AC140172.1-201ENST00000502928 141 ntBASIC4.6□□□□□ -1.67
FREM3P0C091 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.6□□□□□ -1.67
FREM3P0C091 OR7H2P-201ENST00000513483 306 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms