Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL1P09341 AC005341.1-201ENST00000571086 708 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CXCL1P09341 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC3.93□□□□□ -1.78
CXCL1P09341 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC3.93□□□□□ -1.78
CXCL1P09341 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.93□□□□□ -1.78
CXCL1P09341 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC3.93□□□□□ -1.78
CXCL1P09341 AC009597.2-201ENST00000604659 592 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC3.93□□□□□ -1.78
CXCL1P09341 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 MIR6721-201ENST00000617181 87 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 LINC00901.1-201ENST00000617252 152 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AC234782.5-201ENST00000617723 324 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.93□□□□□ -1.78
CXCL1P09341 AC140113.4-201ENST00000622087 222 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AC129778.1-202ENST00000623812 261 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AP001052.1-201ENST00000626421 99 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 TEX41-279ENST00000629149 609 ntTSL 5 BASIC3.93□□□□□ -1.78
CXCL1P09341 AC111152.1-202ENST00000635848 339 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AL591379.1-207ENST00000635982 261 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AMYH02020865.1-205ENST00000636189 261 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 CASC19-274ENST00000642018 970 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AC008691.1-209ENST00000642094 814 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL1P09341 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL1P09341 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL1P09341 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL1P09341 HCFC2P1-201ENST00000392864 1592 ntBASIC3.93□□□□□ -1.78
CXCL1P09341 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CXCL1P09341 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL1P09341 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL1P09341 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL1P09341 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL1P09341 Z98755.1-201ENST00000407015 1384 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL1P09341 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CXCL1P09341 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL1P09341 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL1P09341 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL1P09341 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL1P09341 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL1P09341 TMSB4XP2-201ENST00000335179 210 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 RNA5SP273-201ENST00000362484 113 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 RNU1-83P-201ENST00000363426 164 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL1P09341 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL1P09341 RMRPP5-201ENST00000411156 267 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 AL356968.2-201ENST00000412769 1257 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 EIF4HP2-201ENST00000424380 563 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 AC127526.2-201ENST00000426436 775 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 AC005033.1-201ENST00000428904 813 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC3.92□□□□□ -1.78
CXCL1P09341 RPS27P18-201ENST00000431701 247 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.92□□□□□ -1.78
CXCL1P09341 HMGB3P24-201ENST00000433260 622 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 AL450263.2-201ENST00000439400 589 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL1P09341 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.92□□□□□ -1.78
CXCL1P09341 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL1P09341 RPL5P30-201ENST00000465511 891 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 RPS23P6-201ENST00000466136 431 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL1P09341 AC122718.2-201ENST00000505325 591 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC3.92□□□□□ -1.78
CXCL1P09341 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL1P09341 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC3.92□□□□□ -1.78
CXCL1P09341 RNA5SP438-201ENST00000516561 112 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC3.92□□□□□ -1.78
CXCL1P09341 NRBF2P4-201ENST00000520874 850 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 CETN3-206ENST00000522864 738 ntTSL 3 BASIC3.92□□□□□ -1.78
CXCL1P09341 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.92□□□□□ -1.78
CXCL1P09341 DYNLL1P4-201ENST00000549314 266 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 SMARCE1P3-201ENST00000553649 1231 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 CYCSP38-201ENST00000559840 322 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 AC002310.3-201ENST00000569728 723 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC3.92□□□□□ -1.78
CXCL1P09341 RN7SL708P-201ENST00000580952 299 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL1P09341 AC012616.1-201ENST00000600294 197 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 AL162431.4-201ENST00000604674 411 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 AL008729.2-201ENST00000606393 473 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.92□□□□□ -1.78
CXCL1P09341 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC3.92□□□□□ -1.78
CXCL1P09341 AC005899.6-201ENST00000620729 297 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC3.92□□□□□ -1.78
CXCL1P09341 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL1P09341 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.92□□□□□ -1.78
CXCL1P09341 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL1P09341 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL1P09341 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CXCL1P09341 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC3.92□□□□□ -1.78
CXCL1P09341 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.92□□□□□ -1.78
CXCL1P09341 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL1P09341 OFD1P9Y-201ENST00000417699 1491 ntBASIC3.92□□□□□ -1.78
CXCL1P09341 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.92□□□□□ -1.78
CXCL1P09341 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL1P09341 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXCL1P09341 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CXCL1P09341 DHX9P1-201ENST00000436565 3076 ntBASIC3.91□□□□□ -1.78
CXCL1P09341 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms