Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC006386.1-201ENST00000619436 415 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 AC074276.2-201ENST00000619891 348 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 MIR6730-201ENST00000622213 67 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 AC068787.1-201ENST00000623908 691 ntBASIC6.45□□□□□ -1.38
HLA-DOAP06340 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOAP06340 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.45□□□□□ -1.38
HLA-DOAP06340 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HLA-DOAP06340 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOAP06340 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOAP06340 U3.2-201ENST00000362981 210 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOAP06340 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOAP06340 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 AL121882.1-201ENST00000422893 417 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 AC093655.2-201ENST00000425735 631 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 GAPDHP25-201ENST00000447061 1001 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 AL451063.1-201ENST00000450164 1133 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 OR52Y1P-201ENST00000452418 828 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 RPS18P6-201ENST00000476880 458 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 AC146944.4-201ENST00000602697 718 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 AC068620.3-201ENST00000602749 560 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 AC069307.1-201ENST00000602820 447 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 AC119501.1-201ENST00000603646 475 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 Z99289.3-201ENST00000605586 594 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 AC097460.3-201ENST00000623099 442 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOAP06340 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 AC007342.5-201ENST00000571340 2142 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOAP06340 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOAP06340 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOAP06340 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOAP06340 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOAP06340 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.44□□□□□ -1.38
HLA-DOAP06340 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.44□□□□□ -1.38
HLA-DOAP06340 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-DOAP06340 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DOAP06340 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HLA-DOAP06340 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DOAP06340 AC110792.3-201ENST00000595906 1614 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.43□□□□□ -1.38
HLA-DOAP06340 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DOAP06340 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DOAP06340 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DOAP06340 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
HLA-DOAP06340 RPL23P2-201ENST00000320371 421 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 U8.4-201ENST00000363626 134 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HLA-DOAP06340 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DOAP06340 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HLA-DOAP06340 MTND2P16-201ENST00000419987 799 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 AC005033.1-201ENST00000428904 813 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DOAP06340 AL035090.1-201ENST00000454835 332 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 MTCO2P6-201ENST00000463134 685 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 RN7SL188P-201ENST00000469842 285 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 RPSAP50-201ENST00000481955 852 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.43□□□□□ -1.38
HLA-DOAP06340 AC010468.3-201ENST00000508225 458 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 AC109464.1-201ENST00000511091 819 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 GAPDHP62-201ENST00000515313 990 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DOAP06340 RNU6-334P-201ENST00000517072 102 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-DOAP06340 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-DOAP06340 SOX5P1-201ENST00000524155 1127 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 MTND2P17-201ENST00000550281 688 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.43□□□□□ -1.38
HLA-DOAP06340 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DOAP06340 AP001267.4-201ENST00000602598 545 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms