Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 CR788268.1-201ENST00000603931 1809 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DQB2P05538 AP001157.1-201ENST00000550837 2339 ntBASIC5.13□□□□□ -1.59
HLA-DQB2P05538 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 SCARNA15-201ENST00000607520 4325 ntBASIC5.12□□□□□ -1.59
HLA-DQB2P05538 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 AL163193.1-201ENST00000444895 788 ntBASIC5.12□□□□□ -1.59
HLA-DQB2P05538 CYCSP24-201ENST00000445119 316 ntBASIC5.12□□□□□ -1.59
HLA-DQB2P05538 AC004980.3-201ENST00000447046 365 ntBASIC5.12□□□□□ -1.59
HLA-DQB2P05538 NDUFA5P8-201ENST00000449019 346 ntBASIC5.12□□□□□ -1.59
HLA-DQB2P05538 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 AL691482.1-201ENST00000453255 87 ntBASIC5.12□□□□□ -1.59
HLA-DQB2P05538 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 ENPP7P11-201ENST00000505915 627 ntBASIC5.12□□□□□ -1.59
HLA-DQB2P05538 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.12□□□□□ -1.59
HLA-DQB2P05538 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DQB2P05538 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 THAP12P4-201ENST00000528321 2266 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AP005432.1-201ENST00000580891 3485 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 RNA5SP455-201ENST00000365190 119 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 SNORA70.10-201ENST00000384515 134 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 SNORA66-201ENST00000384792 133 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 ATP5HP3-201ENST00000396994 486 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 DPPA2P3-201ENST00000411853 655 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 SETP9-201ENST00000423837 832 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AL450023.3-201ENST00000440592 271 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 HMGB1P4-201ENST00000455362 567 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AC110749.1-201ENST00000462007 357 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AC004815.1-201ENST00000484185 331 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 NPM1P28-201ENST00000492269 840 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AC093763.2-201ENST00000505334 1223 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AC004980.4-201ENST00000513375 203 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 RNA5SP43-201ENST00000516559 110 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 SCARNA21.2-201ENST00000516600 166 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 MIR4691-201ENST00000583764 85 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AC010503.3-201ENST00000594355 540 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 OR7A8P-201ENST00000595427 913 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AL121612.2-201ENST00000612261 482 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AP000550.3-201ENST00000637734 379 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AC109780.1-201ENST00000451768 1344 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AC011447.7-201ENST00000624228 1590 ntBASIC5.11□□□□□ -1.59
HLA-DQB2P05538 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DQB2P05538 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DQB2P05538 AC013442.1-201ENST00000397347 228 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms