Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TNFP01375 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.02□□□□□ -1.61
TNFP01375 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.01□□□□□ -1.61
TNFP01375 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.01□□□□□ -1.61
TNFP01375 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.01□□□□□ -1.61
TNFP01375 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.01□□□□□ -1.61
TNFP01375 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFP01375 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.01□□□□□ -1.61
TNFP01375 MAPK10-263ENST00000641052 4307 ntBASIC5.01□□□□□ -1.61
TNFP01375 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFP01375 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.01□□□□□ -1.61
TNFP01375 RN7SKP95-201ENST00000362860 303 ntBASIC5.01□□□□□ -1.61
TNFP01375 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TNFP01375 AP002530.1-201ENST00000405705 684 ntBASIC5.01□□□□□ -1.61
TNFP01375 RPL37P18-201ENST00000411602 243 ntBASIC5.01□□□□□ -1.61
TNFP01375 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.01□□□□□ -1.61
TNFP01375 CHEK2P3-201ENST00000416118 248 ntBASIC5.01□□□□□ -1.61
TNFP01375 AL354868.1-201ENST00000417077 482 ntBASIC5.01□□□□□ -1.61
TNFP01375 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.01□□□□□ -1.61
TNFP01375 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.01□□□□□ -1.61
TNFP01375 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.01□□□□□ -1.61
TNFP01375 RPL34P20-201ENST00000442771 351 ntBASIC5.01□□□□□ -1.61
TNFP01375 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.01□□□□□ -1.61
TNFP01375 AL354714.3-201ENST00000447284 493 ntBASIC5.01□□□□□ -1.61
TNFP01375 RPS3AP53-201ENST00000454716 778 ntBASIC5.01□□□□□ -1.61
TNFP01375 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.01□□□□□ -1.61
TNFP01375 RPL7P16-201ENST00000479738 738 ntBASIC5.01□□□□□ -1.61
TNFP01375 AC083982.1-201ENST00000485679 344 ntBASIC5.01□□□□□ -1.61
TNFP01375 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.01□□□□□ -1.61
TNFP01375 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.01□□□□□ -1.61
TNFP01375 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.01□□□□□ -1.61
TNFP01375 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.01□□□□□ -1.61
TNFP01375 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.01□□□□□ -1.61
TNFP01375 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.01□□□□□ -1.61
TNFP01375 MIR4480-201ENST00000582492 71 ntBASIC5.01□□□□□ -1.61
TNFP01375 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.01□□□□□ -1.61
TNFP01375 MIPEPP2-201ENST00000422560 1819 ntBASIC5.01□□□□□ -1.61
TNFP01375 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFP01375 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFP01375 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.01□□□□□ -1.61
TNFP01375 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFP01375 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TNFP01375 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFP01375 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFP01375 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
TNFP01375 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5□□□□□ -1.61
TNFP01375 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5□□□□□ -1.61
TNFP01375 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5□□□□□ -1.61
TNFP01375 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
TNFP01375 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TNFP01375 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5□□□□□ -1.61
TNFP01375 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5□□□□□ -1.61
TNFP01375 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TNFP01375 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5□□□□□ -1.61
TNFP01375 RN7SKP145-201ENST00000363291 303 ntBASIC5□□□□□ -1.61
TNFP01375 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
TNFP01375 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5□□□□□ -1.61
TNFP01375 COX6B1P1-201ENST00000415962 213 ntBASIC5□□□□□ -1.61
TNFP01375 MRPS21P2-201ENST00000424704 264 ntBASIC5□□□□□ -1.61
TNFP01375 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5□□□□□ -1.61
TNFP01375 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5□□□□□ -1.61
TNFP01375 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5□□□□□ -1.61
TNFP01375 AC009238.2-201ENST00000431026 355 ntBASIC5□□□□□ -1.61
TNFP01375 AC090804.1-201ENST00000448870 490 ntBASIC5□□□□□ -1.61
TNFP01375 BX842559.2-201ENST00000451418 605 ntBASIC5□□□□□ -1.61
TNFP01375 SETP4-201ENST00000455717 868 ntBASIC5□□□□□ -1.61
TNFP01375 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5□□□□□ -1.61
TNFP01375 RN7SL319P-201ENST00000480656 221 ntBASIC5□□□□□ -1.61
TNFP01375 AC010350.1-201ENST00000504908 231 ntBASIC5□□□□□ -1.61
TNFP01375 CDH12P4-201ENST00000517835 295 ntBASIC5□□□□□ -1.61
TNFP01375 CDH12P3-201ENST00000517935 295 ntBASIC5□□□□□ -1.61
TNFP01375 CDH12P1-201ENST00000518435 295 ntBASIC5□□□□□ -1.61
TNFP01375 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5□□□□□ -1.61
TNFP01375 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5□□□□□ -1.61
TNFP01375 AC008033.2-201ENST00000542626 177 ntBASIC5□□□□□ -1.61
TNFP01375 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5□□□□□ -1.61
TNFP01375 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5□□□□□ -1.61
TNFP01375 NPM1P5-201ENST00000557228 838 ntBASIC5□□□□□ -1.61
TNFP01375 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5□□□□□ -1.61
TNFP01375 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5□□□□□ -1.61
TNFP01375 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5□□□□□ -1.61
TNFP01375 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5□□□□□ -1.61
TNFP01375 AC105254.2-201ENST00000603636 436 ntBASIC5□□□□□ -1.61
TNFP01375 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5□□□□□ -1.61
TNFP01375 AL136295.6-201ENST00000610486 658 ntBASIC5□□□□□ -1.61
TNFP01375 MIR6839-201ENST00000620425 113 ntBASIC5□□□□□ -1.61
TNFP01375 AC119674.1-217ENST00000641942 1086 ntBASIC5□□□□□ -1.61
TNFP01375 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TNFP01375 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
TNFP01375 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5□□□□□ -1.61
TNFP01375 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5□□□□□ -1.61
TNFP01375 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5□□□□□ -1.61
TNFP01375 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TNFP01375 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TNFP01375 AC016745.2-201ENST00000608834 3443 ntBASIC5□□□□□ -1.61
TNFP01375 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TNFP01375 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
TNFP01375 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
TNFP01375 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TNFP01375 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms