Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNF138P2-201ENST00000603490 592 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 AL683826.1-201ENST00000624104 627 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.07□□□□□ -1.76
SSSCA1O60232 AC135068.12-201ENST00000637370 931 ntBASIC4.07□□□□□ -1.76
SSSCA1O60232 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.07□□□□□ -1.76
SSSCA1O60232 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.07□□□□□ -1.76
SSSCA1O60232 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSSCA1O60232 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSSCA1O60232 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SSSCA1O60232 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.07□□□□□ -1.76
SSSCA1O60232 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSSCA1O60232 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 AL359922.3-201ENST00000624779 1670 ntBASIC4.06□□□□□ -1.76
SSSCA1O60232 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.06□□□□□ -1.76
SSSCA1O60232 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
SSSCA1O60232 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.06□□□□□ -1.76
SSSCA1O60232 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SSSCA1O60232 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SSSCA1O60232 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 MAPK10-349ENST00000641767 3661 ntBASIC4.06□□□□□ -1.76
SSSCA1O60232 AC009643.2-201ENST00000603543 1448 ntBASIC4.06□□□□□ -1.76
SSSCA1O60232 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 AC097461.1-201ENST00000568928 2821 ntBASIC4.06□□□□□ -1.76
SSSCA1O60232 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.06□□□□□ -1.76
SSSCA1O60232 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
SSSCA1O60232 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.06□□□□□ -1.76
SSSCA1O60232 U3.3-201ENST00000362986 216 ntBASIC4.06□□□□□ -1.76
SSSCA1O60232 AL596448.1-201ENST00000415024 392 ntBASIC4.06□□□□□ -1.76
SSSCA1O60232 NPM1P29-201ENST00000483112 803 ntBASIC4.06□□□□□ -1.76
SSSCA1O60232 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.06□□□□□ -1.76
SSSCA1O60232 RNA5SP271-201ENST00000516700 88 ntBASIC4.06□□□□□ -1.76
SSSCA1O60232 RNA5SP373-201ENST00000517271 95 ntBASIC4.06□□□□□ -1.76
SSSCA1O60232 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.06□□□□□ -1.76
SSSCA1O60232 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SSSCA1O60232 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.06□□□□□ -1.76
SSSCA1O60232 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.06□□□□□ -1.76
SSSCA1O60232 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.06□□□□□ -1.76
SSSCA1O60232 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.06□□□□□ -1.76
SSSCA1O60232 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.06□□□□□ -1.76
SSSCA1O60232 RPL10P14-201ENST00000565265 298 ntBASIC4.06□□□□□ -1.76
SSSCA1O60232 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.06□□□□□ -1.76
SSSCA1O60232 AC079315.1-201ENST00000602952 623 ntBASIC4.06□□□□□ -1.76
SSSCA1O60232 AC073592.6-201ENST00000624271 415 ntBASIC4.06□□□□□ -1.76
SSSCA1O60232 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.06□□□□□ -1.76
SSSCA1O60232 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.06□□□□□ -1.76
SSSCA1O60232 AC074101.1-201ENST00000637861 241 ntBASIC4.06□□□□□ -1.76
SSSCA1O60232 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SSSCA1O60232 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSSCA1O60232 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSSCA1O60232 MTCO1P46-201ENST00000451639 1491 ntBASIC4.05□□□□□ -1.76
SSSCA1O60232 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.05□□□□□ -1.76
SSSCA1O60232 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SSSCA1O60232 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSSCA1O60232 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSSCA1O60232 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSSCA1O60232 AC083843.3-201ENST00000623679 2186 ntBASIC4.05□□□□□ -1.76
SSSCA1O60232 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.05□□□□□ -1.76
SSSCA1O60232 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SSSCA1O60232 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSSCA1O60232 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SSSCA1O60232 RNU1-149P-201ENST00000390870 161 ntBASIC4.05□□□□□ -1.76
SSSCA1O60232 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSSCA1O60232 LRRC37BP1-201ENST00000398851 714 ntBASIC4.05□□□□□ -1.76
SSSCA1O60232 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.05□□□□□ -1.76
SSSCA1O60232 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.05□□□□□ -1.76
SSSCA1O60232 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.05□□□□□ -1.76
SSSCA1O60232 QRSL1P2-201ENST00000418582 964 ntBASIC4.05□□□□□ -1.76
SSSCA1O60232 EIF4HP2-201ENST00000424380 563 ntBASIC4.05□□□□□ -1.76
SSSCA1O60232 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.05□□□□□ -1.76
SSSCA1O60232 AC110602.1-201ENST00000437414 318 ntBASIC4.05□□□□□ -1.76
SSSCA1O60232 NPM1P33-201ENST00000438918 872 ntBASIC4.05□□□□□ -1.76
SSSCA1O60232 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.05□□□□□ -1.76
SSSCA1O60232 AC118758.1-202ENST00000454719 225 ntBASIC4.05□□□□□ -1.76
SSSCA1O60232 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
SSSCA1O60232 RN7SL591P-201ENST00000496150 292 ntBASIC4.05□□□□□ -1.76
SSSCA1O60232 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSSCA1O60232 AC138866.2-201ENST00000508650 584 ntBASIC4.05□□□□□ -1.76
SSSCA1O60232 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.05□□□□□ -1.76
SSSCA1O60232 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.05□□□□□ -1.76
SSSCA1O60232 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSSCA1O60232 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.05□□□□□ -1.76
SSSCA1O60232 AC138207.8-204ENST00000579588 527 ntBASIC4.05□□□□□ -1.76
SSSCA1O60232 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.05□□□□□ -1.76
SSSCA1O60232 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.05□□□□□ -1.76
SSSCA1O60232 AP005432.2-201ENST00000608162 586 ntBASIC4.05□□□□□ -1.76
SSSCA1O60232 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSSCA1O60232 AC234782.5-201ENST00000617723 324 ntBASIC4.05□□□□□ -1.76
SSSCA1O60232 MIR6813-201ENST00000621638 56 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms