Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM38O00635 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM38O00635 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
TRIM38O00635 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM38O00635 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
TRIM38O00635 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 RN7SKP128-201ENST00000364270 303 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 RNU6-925P-201ENST00000384629 104 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TRIM38O00635 ATP5HP3-201ENST00000396994 486 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 AL445213.1-201ENST00000412589 747 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 XKRYP4-201ENST00000414395 483 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 BX664727.1-201ENST00000416024 466 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM38O00635 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM38O00635 XKRYP5-201ENST00000449659 483 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM38O00635 RN7SL352P-201ENST00000466002 277 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 AC023245.1-201ENST00000468501 517 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 RNU5A-7P-201ENST00000515979 116 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 SNORA70.20-201ENST00000516848 126 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 BUD31P1-201ENST00000521828 359 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM38O00635 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.86□□□□□ -1.47
TRIM38O00635 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM38O00635 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM38O00635 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM38O00635 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM38O00635 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.86□□□□□ -1.47
TRIM38O00635 MTCYBP28-201ENST00000566728 1132 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 AC010547.6-201ENST00000571789 193 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM38O00635 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.86□□□□□ -1.47
TRIM38O00635 AC006116.5-201ENST00000591936 559 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 AC104763.3-201ENST00000613765 618 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 AL356274.1-201ENST00000617064 410 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TRIM38O00635 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
TRIM38O00635 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
TRIM38O00635 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
TRIM38O00635 AC005224.3-201ENST00000584683 2140 ntBASIC5.86□□□□□ -1.47
TRIM38O00635 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM38O00635 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM38O00635 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM38O00635 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM38O00635 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
TRIM38O00635 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM38O00635 CASC19-261ENST00000641853 1638 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM38O00635 AL034546.1-201ENST00000623740 3693 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TRIM38O00635 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
TRIM38O00635 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM38O00635 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
TRIM38O00635 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM38O00635 AC004076.2-201ENST00000620532 3323 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
TRIM38O00635 AC133552.1-201ENST00000569988 4007 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 SELENOWP1-201ENST00000322792 252 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM38O00635 RNA5SP500-201ENST00000364486 119 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM38O00635 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM38O00635 MIR1178-201ENST00000408396 91 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 AC069282.1-201ENST00000411911 526 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 AL158825.1-201ENST00000414735 521 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM38O00635 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM38O00635 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM38O00635 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.85□□□□□ -1.47
TRIM38O00635 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM38O00635 BX276092.6-201ENST00000430476 250 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM38O00635 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM38O00635 HMGN1P5-201ENST00000448591 263 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM38O00635 BX276092.8-201ENST00000455722 250 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms