Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 RNU1-134P-201ENST00000362935 165 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 DNAJA1P4-201ENST00000406473 1166 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SKP146-201ENST00000410242 334 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 GSTM3P2-201ENST00000412746 530 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AL662791.3-201ENST00000413771 776 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 RPL21P50-201ENST00000417698 477 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC023141.1-201ENST00000419418 379 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC005033.1-201ENST00000428904 813 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 YWHAEP5-201ENST00000431545 765 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 BX119904.1-201ENST00000432026 348 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 GAPDHP34-201ENST00000432112 823 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 GAPDHP48-201ENST00000436626 961 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 MRPL48P1-201ENST00000445390 636 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 HIGD1AP8-201ENST00000453927 274 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AL133244.1-201ENST00000456007 258 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AL157777.1-201ENST00000468100 304 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SL189P-201ENST00000468631 289 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 RPL5P15-201ENST00000475870 897 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 RPS4XP18-201ENST00000495480 763 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AL390726.2-201ENST00000504791 343 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 FGB-207ENST00000509493 1164 ntTSL 5 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC095052.1-201ENST00000509955 863 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 UGT2A3P7-201ENST00000510485 734 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 PPBPP1-201ENST00000510807 373 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC109464.1-201ENST00000511091 819 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 ADI1P2-201ENST00000514945 429 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 MIR2114-201ENST00000516645 80 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 MIR4800-201ENST00000537353 80 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC069240.1-201ENST00000548774 375 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 OR11J2P-201ENST00000555298 907 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AGGF1P9-201ENST00000561884 913 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 VN1R79P-201ENST00000593540 513 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC067773.1-201ENST00000603284 1094 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC092681.3-201ENST00000609463 678 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 MIR7154-201ENST00000620673 73 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AL359715.5-201ENST00000623431 443 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC006971.1-201ENST00000407916 4486 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 AC027287.1-201ENST00000553115 1453 ntBASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHKB-CPT1BH3BT56 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 CASC19-255ENST00000641733 1385 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC235565.1-201ENST00000456962 1325 ntBASIC2.74□□□□□ -1.97
CHKB-CPT1BH3BT56 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms