Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
RCCD1A6NED2 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RCCD1A6NED2 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 RBPJP7-201ENST00000442803 1447 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 RBPJP5-201ENST00000449433 1447 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC007998.4-201ENST00000612496 2533 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 CCT8P1-201ENST00000413611 1657 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 MGP-201ENST00000228938 694 ntTSL 3 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 OR9K1P-201ENST00000326513 941 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 MIR506-201ENST00000384998 124 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 CNN3P1-201ENST00000401596 935 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 RN7SKP266-201ENST00000410232 287 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 BCRP8-201ENST00000412037 255 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 RPL35AP24-201ENST00000413846 330 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AL358942.1-201ENST00000418595 1178 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC023347.2-201ENST00000433994 462 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC239860.1-201ENST00000444680 1270 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 RN7SL180P-201ENST00000466769 294 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 RN7SL65P-201ENST00000485221 315 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 SNORA40.12-201ENST00000516329 111 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 LY96-202ENST00000518893 430 ntTSL 3 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 SCOCP1-201ENST00000554676 349 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC093519.1-201ENST00000566109 298 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC010591.1-201ENST00000603941 649 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC080078.3-201ENST00000605407 463 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 AL080274.1-201ENST00000605565 220 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AL109933.4-201ENST00000612111 157 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC090617.10-201ENST00000624308 134 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC073488.8-201ENST00000631952 757 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 AC026634.1-201ENST00000634369 198 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 MAPK10-365ENST00000641902 3825 ntBASIC8.03□□□□□ -1.12
RCCD1A6NED2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
RCCD1A6NED2 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RCCD1A6NED2 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
RCCD1A6NED2 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
RCCD1A6NED2 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC8.02□□□□□ -1.12
RCCD1A6NED2 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
RCCD1A6NED2 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC8.02□□□□□ -1.13
RCCD1A6NED2 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RCCD1A6NED2 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC8.02□□□□□ -1.13
RCCD1A6NED2 AL034417.4-202ENST00000642135 2236 ntBASIC8.02□□□□□ -1.13
RCCD1A6NED2 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC8.02□□□□□ -1.13
RCCD1A6NED2 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
RCCD1A6NED2 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
RCCD1A6NED2 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RCCD1A6NED2 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.02□□□□□ -1.13
RCCD1A6NED2 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RCCD1A6NED2 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.02□□□□□ -1.13
RCCD1A6NED2 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
RCCD1A6NED2 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC8.02□□□□□ -1.13
RCCD1A6NED2 RNU6-456P-201ENST00000384493 107 ntBASIC8.02□□□□□ -1.13
RCCD1A6NED2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RCCD1A6NED2 AC068050.1-201ENST00000394891 380 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms