Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 BMS1P7-201ENST00000602440 1052 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AL499605.1-201ENST00000604628 403 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AL118522.2-201ENST00000616045 615 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 uc_338.7-201ENST00000621834 124 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AP003476.1-201ENST00000623984 516 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 AC010608.3-201ENST00000625048 527 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 MIR193BHG-214ENST00000641765 509 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 OR5AC4P-202ENST00000642086 985 ntBASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.53□□□□□ -1.52
TCRBV7S3A2A0A539 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 RN7SKP6-201ENST00000364795 319 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 OR13C3-201ENST00000374781 1108 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 TAF9BP2-201ENST00000400856 499 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 DBIP1-201ENST00000401435 260 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 RPS3AP2-201ENST00000407190 754 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 NACAP7-201ENST00000407371 609 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC093155.2-201ENST00000420734 937 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 RPS10P18-201ENST00000442662 495 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 EEF1B2P6-201ENST00000445713 673 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC092691.2-201ENST00000461787 803 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 SETP6-201ENST00000479329 568 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC008410.1-201ENST00000483777 339 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC118282.1-201ENST00000506408 765 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC027369.5-201ENST00000533838 755 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AL512310.9-201ENST00000553311 948 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC025918.2-201ENST00000558683 763 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AL138895.2-201ENST00000603019 178 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC018754.1-201ENST00000607486 925 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC007275.1-201ENST00000621243 671 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 FRG1EP-201ENST00000634469 770 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AP000473.2-201ENST00000602659 1537 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 AC007382.1-201ENST00000624376 2618 ntBASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.52□□□□□ -1.53
TCRBV7S3A2A0A539 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AL645568.2-201ENST00000432815 1337 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 ZNF90P1-201ENST00000480493 1951 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC092111.2-201ENST00000611627 1414 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 OR1L6-202ENST00000373684 1044 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 MIR551A-201ENST00000385042 96 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 MTATP6P31-201ENST00000406985 692 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms