Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC022884.2-201ENST00000578535 580 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 MIR4480-201ENST00000582492 71 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 AL360012.1-201ENST00000602813 131 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 AC108359.1-201ENST00000616451 1211 ntBASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMIM28A0A1B0GU29 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 MIR585-201ENST00000384887 94 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 SNORA77-201ENST00000408716 125 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 AL139128.1-201ENST00000413921 941 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 COX6B1P1-201ENST00000415962 213 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 MGAT2P2-201ENST00000427194 797 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 RPS27AP6-201ENST00000427962 448 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 PRPF38AP2-201ENST00000438179 851 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 AL772161.1-201ENST00000439130 476 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 AC105233.1-201ENST00000498840 781 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 AC016559.2-201ENST00000510759 359 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 AC098976.1-201ENST00000513014 541 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 OR5D2P-201ENST00000524390 911 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 AC021006.3-201ENST00000530771 192 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 GVINP1-202ENST00000531871 7271 ntBASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SMIM28A0A1B0GU29 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 CASC19-260ENST00000641828 2001 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 RNA5SP514-201ENST00000363717 111 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 RN7SKP103-201ENST00000363848 320 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 AL035079.1-201ENST00000405210 287 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 AF186996.5-201ENST00000418098 904 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 COX6CP13-201ENST00000428703 226 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 RPL7P11-201ENST00000437586 658 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 AC006466.1-201ENST00000438721 289 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 RPS29P9-201ENST00000440360 171 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 AC073648.4-201ENST00000442655 781 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 AC005412.2-201ENST00000492004 341 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 GCSHP4-201ENST00000538792 439 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 MTCYBP13-201ENST00000578634 1093 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 AC100827.5-201ENST00000615883 426 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 AC091953.3-201ENST00000623220 236 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 SMG1P7-201ENST00000565246 2704 ntBASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SMIM28A0A1B0GU29 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMIM28A0A1B0GU29 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms